Variant report

Variant	rs73703764
Chromosome Location	chr7:84703742-84703743
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs55907213	1.00[AMR][1000 genomes]
rs56385102	1.00[AMR][1000 genomes]
rs58925383	1.00[AMR][1000 genomes]
rs59657041	1.00[AMR][1000 genomes]
rs59846257	1.00[AMR][1000 genomes]
rs61155011	1.00[AMR][1000 genomes]
rs73703759	1.00[AMR][1000 genomes]
rs73703761	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73711608	1.00[AMR][1000 genomes]
rs73711610	1.00[AMR][1000 genomes]
rs73711612	1.00[AMR][1000 genomes]
rs73711613	1.00[AMR][1000 genomes]
rs73711614	1.00[AMR][1000 genomes]
rs73711617	1.00[AMR][1000 genomes]
rs73711623	1.00[AMR][1000 genomes]
rs73711626	1.00[AMR][1000 genomes]
rs73711630	1.00[AMR][1000 genomes]
rs73713538	1.00[AMR][1000 genomes]
rs73713540	1.00[AMR][1000 genomes]
rs73713545	1.00[AMR][1000 genomes]
rs73713546	1.00[AMR][1000 genomes]
rs73713548	1.00[AMR][1000 genomes]
rs73713549	1.00[AMR][1000 genomes]
rs73713555	1.00[AMR][1000 genomes]
rs73713879	1.00[AMR][1000 genomes]
rs73713880	1.00[AMR][1000 genomes]
rs73713913	1.00[AMR][1000 genomes]
rs73713928	1.00[AMR][1000 genomes]
rs73713929	1.00[AMR][1000 genomes]
rs73713930	1.00[AMR][1000 genomes]
rs73713931	1.00[AMR][1000 genomes]
rs73713936	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949446	chr7:84003501-84763823	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	esv2422324	chr7:84530290-84944913	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
3	nsv916645	chr7:84678606-85420011	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv869255	chr7:84678606-85444155	Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
5	nsv1032610	chr7:84683282-84725413	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	nsv1034620	chr7:84701267-84791576	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:84693000-84705400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:84696000-84717600	Weak transcription	Fetal Stomach	stomach
3	chr7:84698400-84704800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr7:84700000-84704400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr7:84700600-84705000	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr7:84700800-84704000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr7:84701200-84715400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr7:84701400-84704800	Weak transcription	Fetal Kidney	kidney
9	chr7:84701400-84709800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr7:84701800-84707200	Weak transcription	Fetal Lung	lung
11	chr7:84703400-84703800	Enhancers	Muscle Satellite Cultured Cells	--

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