Variant report

Variant	rs73713555
Chromosome Location	chr7:84508833-84508834
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:84420135..84422964-chr7:84508124..84511065,2	K562	blood:
2	chr7:84500124..84502806-chr7:84508171..84509903,2	K562	blood:
3	chr7:84508483..84511432-chr7:84516056..84517818,2	K562	blood:
4	chr7:84440104..84442892-chr7:84507245..84509038,2	K562	blood:
5	chr7:84475070..84479016-chr7:84505987..84511663,5	K562	blood:
6	chr7:84508797..84511350-chr7:84512443..84514442,2	K562	blood:
7	chr7:84503629..84506540-chr7:84507302..84509913,4	K562	blood:
8	chr7:84495091..84496755-chr7:84507869..84510103,2	K562	blood:
9	chr7:84453275..84455457-chr7:84508564..84511405,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000232605	Chromatin interaction
ENSG00000235243	Chromatin interaction

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs55907213	1.00[AMR][1000 genomes]
rs56308636	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56385102	1.00[AMR][1000 genomes]
rs58138808	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58925383	1.00[AMR][1000 genomes]
rs59348422	1.00[AMR][1000 genomes]
rs59657041	1.00[AMR][1000 genomes]
rs59846257	1.00[AMR][1000 genomes]
rs60691164	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61155011	1.00[AMR][1000 genomes]
rs61463589	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73703759	1.00[AMR][1000 genomes]
rs73703761	1.00[AMR][1000 genomes]
rs73703764	1.00[AMR][1000 genomes]
rs73711226	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73711260	1.00[AMR][1000 genomes]
rs73711608	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73711610	1.00[AMR][1000 genomes]
rs73711612	1.00[AMR][1000 genomes]
rs73711613	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73711614	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73711617	1.00[AMR][1000 genomes]
rs73711623	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73711626	1.00[AMR][1000 genomes]
rs73711630	1.00[AMR][1000 genomes]
rs73712829	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712831	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712836	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712837	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712839	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712853	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712858	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712859	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73712862	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73713538	1.00[AMR][1000 genomes]
rs73713540	1.00[AMR][1000 genomes]
rs73713545	1.00[AMR][1000 genomes]
rs73713546	1.00[AMR][1000 genomes]
rs73713548	1.00[AMR][1000 genomes]
rs73713549	1.00[AMR][1000 genomes]
rs73713879	1.00[AMR][1000 genomes]
rs73713880	1.00[AMR][1000 genomes]
rs73713913	1.00[AMR][1000 genomes]
rs73713928	1.00[AMR][1000 genomes]
rs73713929	1.00[AMR][1000 genomes]
rs73713930	1.00[AMR][1000 genomes]
rs73713931	1.00[AMR][1000 genomes]
rs73713936	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529344	chr7:83714286-84592857	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv949446	chr7:84003501-84763823	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	esv34238	chr7:84279023-84591966	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv831050	chr7:84355996-84527261	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:84507800-84510600	Active TSS	K562	blood
2	chr7:84508400-84511200	Weak transcription	Right Atrium	heart
3	chr7:84508800-84509800	Enhancers	Fetal Brain Male	brain

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