Variant report

Variant	rs73709747
Chromosome Location	chr8:130451141-130451142
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs16904033	1.00[AMR][1000 genomes]
rs16904045	1.00[AMR][1000 genomes]
rs55749850	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56274919	1.00[AMR][1000 genomes]
rs61178004	1.00[AMR][1000 genomes]
rs6995255	1.00[AMR][1000 genomes]
rs7013707	1.00[AMR][1000 genomes]
rs73709696	1.00[AMR][1000 genomes]
rs73709703	1.00[AMR][1000 genomes]
rs73712622	1.00[AMR][1000 genomes]
rs73712623	1.00[AMR][1000 genomes]
rs73712630	1.00[AMR][1000 genomes]
rs73712632	1.00[AMR][1000 genomes]
rs73712633	1.00[AMR][1000 genomes]
rs73712635	1.00[AMR][1000 genomes]
rs73712723	1.00[AMR][1000 genomes]
rs73712724	1.00[AMR][1000 genomes]
rs73712725	1.00[AMR][1000 genomes]
rs73712726	1.00[AMR][1000 genomes]
rs73712727	1.00[AMR][1000 genomes]
rs73712729	1.00[AMR][1000 genomes]
rs7828399	1.00[AMR][1000 genomes]
rs7846460	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429942	chr8:130397818-130460011	Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1015611	chr8:130449321-130502086	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130448600-130458800	Weak transcription	Monocytes-CD14+_RO01746	blood
2	chr8:130449400-130452800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr8:130450600-130452000	Strong transcription	K562	blood
4	chr8:130451000-130452200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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