Variant report

Variant	rs73712630
Chromosome Location	chr8:130409064-130409065
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16904033	1.00[AMR][1000 genomes]
rs16904045	1.00[AMR][1000 genomes]
rs55749850	1.00[AMR][1000 genomes]
rs56274919	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61178004	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73709696	1.00[AMR][1000 genomes]
rs73709703	1.00[AMR][1000 genomes]
rs73709747	1.00[AMR][1000 genomes]
rs73712622	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73712623	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73712632	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73712633	1.00[AMR][1000 genomes]
rs73712635	1.00[AMR][1000 genomes]
rs73712723	1.00[AMR][1000 genomes]
rs73712724	1.00[AMR][1000 genomes]
rs73712725	1.00[AMR][1000 genomes]
rs73712726	1.00[AMR][1000 genomes]
rs73712727	1.00[AMR][1000 genomes]
rs73712729	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429942	chr8:130397818-130460011	Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130394800-130411800	Strong transcription	K562	blood
2	chr8:130407000-130411800	Weak transcription	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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