Variant report

Variant	rs73712299
Chromosome Location	chr7:103563222-103563223
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10277802	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10487175	0.80[EUR][1000 genomes]
rs12154742	0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16872993	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16873008	0.80[EUR][1000 genomes]
rs2192305	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55833200	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57179739	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58352612	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58751603	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59086068	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73712300	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73712302	0.93[EUR][1000 genomes]
rs73715903	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs73715905	0.80[EUR][1000 genomes]
rs73715906	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73715908	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73715910	0.80[EUR][1000 genomes]
rs756435	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv523466	chr7:103547135-103567525	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv933391	chr7:103557392-103588539	Weak transcription Flanking Active TSS Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv971218	chr7:103561948-103585213	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103556800-103574400	Weak transcription	HepG2	liver
2	chr7:103561600-103564400	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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