Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103120247..103122093-chr7:103122953..103125479,2	K562	blood:
2	chr7:103118863..103120878-chr7:103139422..103141914,2	K562	blood:

Variant related genes	Relation type
ENSG00000189056	Chromatin interaction
ENSG00000222386	Chromatin interaction

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10262359	0.95[ASN][1000 genomes]
rs2299334	0.85[AMR][1000 genomes]
rs2429046	0.95[ASN][1000 genomes]
rs2528858	0.95[ASN][1000 genomes]
rs2528870	0.98[ASN][1000 genomes]
rs2528877	0.98[ASN][1000 genomes]
rs2711835	0.95[ASN][1000 genomes]
rs2711845	0.96[ASN][1000 genomes]
rs2711848	0.90[ASN][1000 genomes]
rs2711850	0.95[ASN][1000 genomes]
rs2965085	0.95[ASN][1000 genomes]
rs3779521	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3808032	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3808034	1.00[EUR][1000 genomes]
rs3808039	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3808040	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3808048	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs55865436	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56331323	0.83[EUR][1000 genomes]
rs58135847	0.85[AMR][1000 genomes]
rs59498470	0.95[ASN][1000 genomes]
rs59645313	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59850329	0.93[ASN][1000 genomes]
rs60546391	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73714409	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73714431	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030446	chr7:102932689-103221638	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv491911	chr7:102967150-103403622	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103103600-103121400	Weak transcription	HepG2	liver
2	chr7:103115800-103121200	Weak transcription	K562	blood
3	chr7:103118400-103138000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr7:103120000-103122200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr7:103120000-103122200	Weak transcription	Brain Substantia Nigra	brain
6	chr7:103120600-103122200	Weak transcription	Brain Anterior Caudate	brain

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