Variant report

Variant	rs73719714
Chromosome Location	chr7:122236768-122236769
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs2192023	0.83[AFR][1000 genomes]
rs2430019	0.83[AFR][1000 genomes]
rs2471201	0.83[AFR][1000 genomes]
rs28397617	0.91[AFR][1000 genomes]
rs28415980	0.83[AFR][1000 genomes]
rs55933077	1.00[AFR][1000 genomes]
rs56185713	0.91[AFR][1000 genomes]
rs57121578	0.83[AFR][1000 genomes]
rs58174606	0.91[AFR][1000 genomes]
rs58478325	0.91[AFR][1000 genomes]
rs59855207	0.91[AFR][1000 genomes]
rs60560320	0.91[AFR][1000 genomes]
rs73717680	0.91[AFR][1000 genomes]
rs73717681	0.91[AFR][1000 genomes]
rs73717682	0.91[AFR][1000 genomes]
rs73717683	0.91[AFR][1000 genomes]
rs73717684	1.00[AFR][1000 genomes]
rs73717685	0.91[AFR][1000 genomes]
rs73717687	1.00[AFR][1000 genomes]
rs73717688	0.91[AFR][1000 genomes]
rs73717689	0.91[AFR][1000 genomes]
rs73717695	0.91[AFR][1000 genomes]
rs73717700	1.00[AFR][1000 genomes]
rs73717701	0.91[AFR][1000 genomes]
rs73719703	1.00[AFR][1000 genomes]
rs73719707	0.91[AFR][1000 genomes]
rs73719709	1.00[AFR][1000 genomes]
rs73719713	0.91[AFR][1000 genomes]
rs73719716	0.91[AFR][1000 genomes]
rs73719717	0.83[AFR][1000 genomes]
rs73719719	0.83[AFR][1000 genomes]
rs73719721	0.91[AFR][1000 genomes]
rs9918712	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv532178	chr7:122203056-122978846	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122217600-122265600	Weak transcription	Aorta	Aorta
2	chr7:122231200-122246200	Weak transcription	Left Ventricle	heart
3	chr7:122236400-122237000	Weak transcription	Pancreas	Pancrea
4	chr7:122236600-122236800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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