Variant report
Variant | rs73719973 |
---|---|
Chromosome Location | chr7:119236343-119236344 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:119090628..119092465-chr7:119234986..119236766,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs12534787 | 1.00[AMR][1000 genomes] |
rs12536031 | 1.00[AMR][1000 genomes] |
rs12539502 | 1.00[AMR][1000 genomes] |
rs12539686 | 1.00[AMR][1000 genomes] |
rs17142318 | 1.00[AMR][1000 genomes] |
rs1880280 | 0.83[AMR][1000 genomes] |
rs1916860 | 1.00[AMR][1000 genomes] |
rs55884881 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs56117135 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs56190766 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs56280460 | 1.00[AMR][1000 genomes] |
rs56313518 | 1.00[AMR][1000 genomes] |
rs58034992 | 1.00[AMR][1000 genomes] |
rs58446133 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58894214 | 1.00[AMR][1000 genomes] |
rs61147847 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73719970 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73719971 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73720100 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73720531 | 0.83[AMR][1000 genomes] |
rs73720538 | 1.00[AMR][1000 genomes] |
rs73720542 | 1.00[AMR][1000 genomes] |
rs73720543 | 1.00[AMR][1000 genomes] |
rs73720545 | 1.00[AMR][1000 genomes] |
rs73720549 | 1.00[AMR][1000 genomes] |
rs73720550 | 1.00[AMR][1000 genomes] |
rs73720551 | 1.00[AMR][1000 genomes] |
rs73720703 | 1.00[AMR][1000 genomes] |
rs73722406 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73722414 | 1.00[AMR][1000 genomes] |
rs73722418 | 1.00[AMR][1000 genomes] |
rs73722424 | 1.00[AMR][1000 genomes] |
rs73722425 | 1.00[AMR][1000 genomes] |
rs73722662 | 1.00[AMR][1000 genomes] |
rs73722665 | 1.00[AMR][1000 genomes] |
rs73722667 | 1.00[AMR][1000 genomes] |
rs7789253 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv889100 | chr7:118744450-119247571 | Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
2 | nsv949327 | chr7:119179990-119402882 | Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
3 | nsv889114 | chr7:119206096-119440159 | Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
4 | nsv1020551 | chr7:119232910-119292763 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer | Chromatin interactive regionlncRNA | n/a | inside rSNPs | n/a |
5 | nsv970422 | chr7:119233323-119244802 | Enhancers Bivalent Enhancer | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:119234000-119236400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
2 | chr7:119234800-119236400 | Bivalent Enhancer | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |