The 2.0 version of rSNPBase

Variant report

Variant rs73742557
Chromosome Location chr6:28352746-28352747
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28324400-28357200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr6:28324400-28357600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:28324600-28358600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr6:28345000-28361600 Strong transcription Dnd41 blood
5 chr6:28348400-28357800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:28350400-28353600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr6:28350400-28357600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr6:28350400-28358200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr6:28350400-28358200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr6:28351200-28358000 Weak transcription Small Intestine intestine
11 chr6:28351200-28358200 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr6:28351400-28354800 Weak transcription Primary T cells fromperipheralblood blood
13 chr6:28351400-28357000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr6:28351400-28357400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr6:28351600-28353200 Weak transcription HSMM muscle
16 chr6:28351600-28353600 Weak transcription Brain Cingulate Gyrus brain
17 chr6:28351600-28354000 Weak transcription Fetal Muscle Leg muscle
18 chr6:28351600-28354800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr6:28351600-28355000 Weak transcription Lung lung
20 chr6:28351600-28355000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr6:28351600-28355000 Weak transcription Thymus Thymus
22 chr6:28351600-28355600 Weak transcription Aorta Aorta
23 chr6:28351600-28355600 Weak transcription Placenta Placenta
24 chr6:28351600-28355800 Weak transcription Brain Substantia Nigra brain
25 chr6:28351600-28357000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:28351600-28357200 Weak transcription Muscle Satellite Cultured Cells --
27 chr6:28351600-28357400 Weak transcription Fetal Kidney kidney
28 chr6:28351600-28357600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr6:28351600-28357600 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr6:28351600-28357600 Weak transcription Esophagus oesophagus
31 chr6:28351600-28357600 Weak transcription Pancreas Pancrea
32 chr6:28351600-28358200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:28351600-28358200 Weak transcription Fetal Brain Male brain
34 chr6:28351600-28358200 Weak transcription Right Ventricle heart
35 chr6:28351600-28358200 Weak transcription Spleen Spleen
36 chr6:28351600-28358200 Weak transcription HSMMtube muscle
37 chr6:28351600-28358400 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr6:28351600-28358400 Weak transcription Colonic Mucosa Colon
39 chr6:28351600-28358400 Weak transcription Gastric stomach
40 chr6:28351600-28358400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr6:28351600-28358400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr6:28351600-28358600 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr6:28351600-28358600 Weak transcription Psoas Muscle Psoas
44 chr6:28351600-28364600 Weak transcription Right Atrium heart
45 chr6:28351800-28352800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:28351800-28352800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
47 chr6:28351800-28352800 Weak transcription Brain Anterior Caudate brain
48 chr6:28351800-28353000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr6:28351800-28353000 Weak transcription Brain Germinal Matrix brain
50 chr6:28351800-28353000 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015