The 2.0 version of rSNPBase

Variant report

Variant rs737490
Chromosome Location chr1:185529692-185529693
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185521000-185533800 Weak transcription Placenta Placenta
2 chr1:185525400-185536000 Weak transcription Stomach Mucosa stomach
3 chr1:185526400-185533800 Weak transcription Osteobl bone
4 chr1:185526600-185530600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:185527600-185530400 Enhancers Rectal Mucosa Donor 31 rectum
6 chr1:185527800-185530000 Weak transcription Left Ventricle heart
7 chr1:185527800-185532400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr1:185528000-185536000 Weak transcription Fetal Kidney kidney
9 chr1:185528200-185531800 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chr1:185528400-185530600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr1:185528400-185530600 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr1:185528400-185530600 Enhancers Primary T killer memory cells from peripheral blood blood
13 chr1:185528400-185530800 Enhancers Monocytes-CD14+_RO01746 blood
14 chr1:185528400-185531000 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr1:185528400-185531200 Enhancers Primary hematopoietic stem cells blood
16 chr1:185528400-185531800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:185528400-185532400 Enhancers Primary T helper cells fromperipheralblood blood
18 chr1:185528600-185529800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:185528600-185530800 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr1:185528600-185530800 Enhancers GM12878-XiMat blood
21 chr1:185528600-185531000 Enhancers Primary monocytes fromperipheralblood blood
22 chr1:185528600-185531200 Enhancers Primary T cells fromperipheralblood blood
23 chr1:185528600-185531400 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr1:185528600-185533000 Enhancers Primary T cells from cord blood blood
25 chr1:185528600-185539800 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr1:185528800-185530000 Enhancers Brain Substantia Nigra brain
27 chr1:185528800-185530400 Enhancers Primary B cells from cord blood blood
28 chr1:185528800-185530800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:185528800-185530800 Enhancers Spleen Spleen
30 chr1:185528800-185531000 Enhancers Primary B cells from peripheral blood blood
31 chr1:185528800-185531200 Enhancers Primary mononuclear cells fromperipheralblood Blood
32 chr1:185528800-185531600 Enhancers Fetal Thymus thymus
33 chr1:185528800-185531800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:185528800-185531800 Enhancers Primary T killer naive cells fromperipheralblood blood
35 chr1:185528800-185531800 Enhancers Thymus Thymus
36 chr1:185528800-185532800 Enhancers Primary T helper cells PMA-I stimulated --
37 chr1:185529000-185530000 Enhancers Dnd41 blood
38 chr1:185529000-185530800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:185529200-185529800 Enhancers Cortex derived primary cultured neurospheres brain
40 chr1:185529200-185530000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr1:185529200-185530000 Enhancers Brain Cingulate Gyrus brain
42 chr1:185529200-185535400 Weak transcription Small Intestine intestine
43 chr1:185529400-185530400 Enhancers Duodenum Mucosa Duodenum
44 chr1:185529400-185530600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:185529400-185531400 Enhancers Primary neutrophils fromperipheralblood blood
46 chr1:185529400-185533200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:185529400-185533800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:185529400-185534000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:185529400-185534000 Weak transcription Fetal Heart heart
50 chr1:185529400-185543000 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015