The 2.0 version of rSNPBase

Variant report

Variant rs333704
Chromosome Location chr1:185539843-185539844
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185529400-185543000 Weak transcription Pancreas Pancrea
2 chr1:185530800-185544000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:185531800-185540400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:185533000-185540200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:185533000-185540800 Enhancers NHEK skin
6 chr1:185534200-185540000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:185534600-185540200 Enhancers Primary neutrophils fromperipheralblood blood
8 chr1:185534800-185543000 Weak transcription A549 lung
9 chr1:185535000-185543400 Weak transcription HSMMtube muscle
10 chr1:185536200-185542000 Enhancers Placenta Amnion Placenta Amnion
11 chr1:185536800-185540600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr1:185537000-185540400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:185537000-185540400 Enhancers Primary T helper cells PMA-I stimulated --
14 chr1:185537000-185540600 Enhancers Primary T cells from cord blood blood
15 chr1:185537000-185540600 Enhancers Primary T helper naive cells fromperipheralblood blood
16 chr1:185537200-185540000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:185537200-185540000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:185537200-185543000 Weak transcription Small Intestine intestine
19 chr1:185538000-185541800 Enhancers Fetal Intestine Large intestine
20 chr1:185538200-185542000 Weak transcription Primary B cells from peripheral blood blood
21 chr1:185538400-185541600 Enhancers Fetal Intestine Small intestine
22 chr1:185538600-185540000 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:185538600-185542800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:185538800-185540000 Weak transcription HMEC breast
25 chr1:185538800-185542400 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr1:185539000-185540000 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:185539000-185540600 Enhancers Rectal Mucosa Donor 31 rectum
28 chr1:185539000-185542400 Weak transcription Primary monocytes fromperipheralblood blood
29 chr1:185539400-185540400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr1:185539400-185541600 Enhancers Fetal Kidney kidney
31 chr1:185539600-185540000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr1:185539600-185540600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:185539800-185540400 Enhancers Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015