The 2.0 version of rSNPBase

Variant report

Variant rs507076
Chromosome Location chr1:185535823-185535824
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185525400-185536000 Weak transcription Stomach Mucosa stomach
2 chr1:185528000-185536000 Weak transcription Fetal Kidney kidney
3 chr1:185528600-185539800 Enhancers Primary T helper 17 cells PMA-I stimulated --
4 chr1:185529400-185543000 Weak transcription Pancreas Pancrea
5 chr1:185530400-185536000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:185530800-185536600 Weak transcription Left Ventricle heart
7 chr1:185530800-185544000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:185531200-185536000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:185531800-185540400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:185532200-185536200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:185532800-185538800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:185533000-185538800 Enhancers HMEC breast
13 chr1:185533000-185540200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:185533000-185540800 Enhancers NHEK skin
15 chr1:185533200-185536000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr1:185533400-185536000 Enhancers Primary T cells from cord blood blood
17 chr1:185533400-185539000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr1:185533600-185536000 Enhancers Primary T helper cells fromperipheralblood blood
19 chr1:185533600-185536400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:185533800-185536400 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr1:185534000-185536000 Enhancers Thymus Thymus
22 chr1:185534000-185537000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:185534000-185537200 Enhancers Fetal Heart heart
24 chr1:185534200-185537800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:185534200-185540000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:185534400-185536000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:185534400-185536000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:185534400-185536200 Enhancers Primary T helper naive cells from peripheral blood blood
29 chr1:185534400-185536400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr1:185534400-185538800 Enhancers Primary hematopoietic stem cells blood
31 chr1:185534600-185536000 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr1:185534600-185538600 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr1:185534600-185540200 Enhancers Primary neutrophils fromperipheralblood blood
34 chr1:185534800-185536000 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:185534800-185536200 Weak transcription Placenta Amnion Placenta Amnion
36 chr1:185534800-185536200 Weak transcription Osteobl bone
37 chr1:185534800-185536600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:185534800-185539200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:185534800-185543000 Weak transcription A549 lung
40 chr1:185535000-185536000 Enhancers Primary B cells from cord blood blood
41 chr1:185535000-185536000 Weak transcription NH-A brain
42 chr1:185535000-185543400 Weak transcription HSMMtube muscle
43 chr1:185535200-185538200 Enhancers Primary B cells from peripheral blood blood
44 chr1:185535400-185536000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr1:185535400-185537200 Enhancers Duodenum Mucosa Duodenum
46 chr1:185535400-185537200 Enhancers Small Intestine intestine
47 chr1:185535800-185536200 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:185535800-185536200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
49 chr1:185535800-185536200 Weak transcription Fetal Thymus thymus
50 chr1:185535800-185536200 Enhancers Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015