The 2.0 version of rSNPBase

Variant report

Variant rs333705
Chromosome Location chr1:185540013-185540014
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185529400-185543000 Weak transcription Pancreas Pancrea
2 chr1:185530800-185544000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:185531800-185540400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:185533000-185540200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:185533000-185540800 Enhancers NHEK skin
6 chr1:185534600-185540200 Enhancers Primary neutrophils fromperipheralblood blood
7 chr1:185534800-185543000 Weak transcription A549 lung
8 chr1:185535000-185543400 Weak transcription HSMMtube muscle
9 chr1:185536200-185542000 Enhancers Placenta Amnion Placenta Amnion
10 chr1:185536800-185540600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr1:185537000-185540400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:185537000-185540400 Enhancers Primary T helper cells PMA-I stimulated --
13 chr1:185537000-185540600 Enhancers Primary T cells from cord blood blood
14 chr1:185537000-185540600 Enhancers Primary T helper naive cells fromperipheralblood blood
15 chr1:185537200-185543000 Weak transcription Small Intestine intestine
16 chr1:185538000-185541800 Enhancers Fetal Intestine Large intestine
17 chr1:185538200-185542000 Weak transcription Primary B cells from peripheral blood blood
18 chr1:185538400-185541600 Enhancers Fetal Intestine Small intestine
19 chr1:185538600-185542800 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr1:185538800-185542400 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr1:185539000-185540600 Enhancers Rectal Mucosa Donor 31 rectum
22 chr1:185539000-185542400 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:185539400-185540400 Enhancers Primary T helper cells fromperipheralblood blood
24 chr1:185539400-185541600 Enhancers Fetal Kidney kidney
25 chr1:185539600-185540600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:185539800-185540400 Enhancers Primary T cells fromperipheralblood blood
27 chr1:185540000-185540200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:185540000-185540200 Enhancers Primary T regulatory cells fromperipheralblood blood
29 chr1:185540000-185540200 Enhancers Sigmoid Colon Sigmoid Colon
30 chr1:185540000-185540400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr1:185540000-185540600 Enhancers HMEC breast
32 chr1:185540000-185540800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015