The 2.0 version of rSNPBase

Variant report

Variant rs333720
Chromosome Location chr1:185543000-185543001
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185529400-185543000 Weak transcription Pancreas Pancrea
2 chr1:185530800-185544000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:185534800-185543000 Weak transcription A549 lung
4 chr1:185535000-185543400 Weak transcription HSMMtube muscle
5 chr1:185537200-185543000 Weak transcription Small Intestine intestine
6 chr1:185540200-185543000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:185540400-185543000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:185540600-185543000 Weak transcription HMEC breast
9 chr1:185540600-185551200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:185540800-185543000 Weak transcription NHEK skin
11 chr1:185542000-185543000 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:185542000-185543800 Enhancers Fetal Kidney kidney
13 chr1:185542000-185544000 Enhancers Primary neutrophils fromperipheralblood blood
14 chr1:185542000-185544200 Enhancers Primary B cells from peripheral blood blood
15 chr1:185542200-185544400 Enhancers Fetal Intestine Large intestine
16 chr1:185542400-185543800 Enhancers Primary monocytes fromperipheralblood blood
17 chr1:185542400-185544000 Enhancers Primary B cells from cord blood blood
18 chr1:185542400-185544000 Enhancers Monocytes-CD14+_RO01746 blood
19 chr1:185542600-185543600 Enhancers Fetal Intestine Small intestine
20 chr1:185542800-185543400 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr1:185542800-185543400 Enhancers Primary T helper cells PMA-I stimulated --
22 chr1:185543000-185543200 Enhancers Pancreas Pancrea
23 chr1:185543000-185543200 Enhancers Small Intestine intestine
24 chr1:185543000-185543600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:185543000-185543800 Enhancers HepG2 liver
26 chr1:185543000-185544000 Enhancers Placenta Amnion Placenta Amnion
27 chr1:185543000-185544000 Enhancers A549 lung
28 chr1:185543000-185544200 Enhancers HMEC breast
29 chr1:185543000-185544400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:185543000-185544400 Enhancers NHEK skin

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Last update: Aug 31, 2015