The 2.0 version of rSNPBase

Variant report

Variant rs73754199
Chromosome Location chr6:88049494-88049495
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:88033000-88055200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:88033200-88056400 Weak transcription Liver Liver
3 chr6:88033200-88062200 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr6:88039000-88051400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:88039000-88068400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr6:88039000-88078400 Weak transcription Fetal Stomach stomach
7 chr6:88039400-88061200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr6:88039800-88051000 Weak transcription GM12878-XiMat blood
9 chr6:88040200-88075800 Weak transcription Fetal Muscle Trunk muscle
10 chr6:88040600-88116800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:88040800-88052600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr6:88043600-88058400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr6:88043800-88056400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr6:88043800-88056800 Weak transcription Primary monocytes fromperipheralblood blood
15 chr6:88043800-88061400 Weak transcription Gastric stomach
16 chr6:88043800-88068400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr6:88044000-88052400 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr6:88044000-88052600 Weak transcription Thymus Thymus
19 chr6:88044000-88053600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr6:88044000-88054000 Weak transcription Dnd41 blood
21 chr6:88044000-88054200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr6:88044000-88056000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr6:88044000-88071400 Weak transcription Fetal Muscle Leg muscle
24 chr6:88044200-88051400 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr6:88044400-88049800 Weak transcription Fetal Intestine Small intestine
26 chr6:88044400-88051000 Weak transcription Pancreas Pancrea
27 chr6:88044400-88053000 Weak transcription Primary T cells fromperipheralblood blood
28 chr6:88044400-88056000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr6:88044400-88056800 Weak transcription Fetal Thymus thymus
30 chr6:88044400-88076000 Weak transcription Primary hematopoietic stem cells blood
31 chr6:88044800-88053800 Weak transcription Psoas Muscle Psoas
32 chr6:88044800-88072600 Weak transcription Adipose Nuclei Adipose
33 chr6:88044800-88075600 Weak transcription Fetal Lung lung
34 chr6:88045000-88054000 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr6:88045000-88054600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:88045000-88059800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr6:88045400-88053400 Weak transcription Primary T cells from cord blood blood
38 chr6:88046200-88055800 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr6:88046400-88050400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr6:88046400-88053400 Weak transcription Primary B cells from cord blood blood
41 chr6:88046400-88054400 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr6:88046600-88051600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr6:88046600-88055600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr6:88047200-88056600 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr6:88048000-88050200 Enhancers Fetal Heart heart
46 chr6:88048200-88059000 Weak transcription Fetal Brain Female brain
47 chr6:88048600-88053800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr6:88048800-88051000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr6:88049200-88066800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr6:88049400-88049600 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015