Variant report

Variant	rs73765218
Chromosome Location	chr6:113798325-113798326
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10484460	1.00[AMR][1000 genomes]
rs17075154	1.00[AMR][1000 genomes]
rs17075210	1.00[AMR][1000 genomes]
rs55812012	1.00[AMR][1000 genomes]
rs57194334	1.00[AMR][1000 genomes]
rs57950622	1.00[AMR][1000 genomes]
rs60729491	1.00[AMR][1000 genomes]
rs73765216	1.00[AMR][1000 genomes]
rs7740950	1.00[AMR][1000 genomes]
rs9918448	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv1021815	chr6:113703567-113799956	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv518991	chr6:113760526-113799618	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv522088	chr6:113788356-113809585	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113796400-113799200	Enhancers	Adipose Nuclei	Adipose
2	chr6:113796800-113798800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr6:113797000-113798800	Enhancers	Osteobl	bone
4	chr6:113797200-113798800	Weak transcription	Pancreas	Pancrea
5	chr6:113797400-113798400	Enhancers	H9 Cell Line	embryonic stem cell
6	chr6:113797600-113798400	Enhancers	HMEC	breast
7	chr6:113797600-113799200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr6:113797800-113799000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr6:113797800-113799000	Enhancers	NHDF-Ad	bronchial
10	chr6:113798000-113799200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr6:113798200-113798600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr6:113798200-113798600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr6:113798200-113798600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr6:113798200-113799000	Enhancers	Psoas Muscle	Psoas

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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