Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10484456	1.00[EUR][1000 genomes]
rs10484460	0.91[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17075154	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17075210	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2068614	1.00[EUR][1000 genomes]
rs2068615	1.00[EUR][1000 genomes]
rs55715533	1.00[EUR][1000 genomes]
rs55812012	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56098259	1.00[EUR][1000 genomes]
rs57194334	1.00[AMR][1000 genomes]
rs57950622	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60729491	1.00[AMR][1000 genomes]
rs73539771	1.00[EUR][1000 genomes]
rs73765209	1.00[EUR][1000 genomes]
rs73765210	1.00[EUR][1000 genomes]
rs73765212	1.00[EUR][1000 genomes]
rs73765216	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73765218	1.00[AMR][1000 genomes]
rs7762969	1.00[CHD][hapmap]
rs9488173	1.00[EUR][1000 genomes]
rs9488201	1.00[EUR][1000 genomes]
rs9918448	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv1034256	chr6:113703567-113793790	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1021815	chr6:113703567-113799956	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113733400-113738400	Enhancers	NHDF-Ad	bronchial
2	chr6:113733800-113738200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:113733800-113738200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr6:113735400-113738000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:113735600-113738200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr6:113736000-113747200	Weak transcription	HMEC	breast
7	chr6:113736200-113738200	Weak transcription	NHEK	skin
8	chr6:113737200-113738000	Enhancers	Muscle Satellite Cultured Cells	--
9	chr6:113737200-113738200	Enhancers	Osteobl	bone
10	chr6:113737800-113738000	Enhancers	HSMM	muscle
11	chr6:113737800-113739600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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