Variant report

Variant	rs73765255
Chromosome Location	chr6:113847805-113847806
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs55634095	1.00[AMR][1000 genomes]
rs56235437	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59948514	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60821033	1.00[AFR][1000 genomes]
rs73765220	1.00[AMR][1000 genomes]
rs73765246	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73765248	1.00[AMR][1000 genomes]
rs73765270	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73765276	1.00[AMR][1000 genomes]
rs73765277	1.00[AMR][1000 genomes]
rs73765279	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73765281	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73765282	1.00[AMR][1000 genomes]
rs73765284	1.00[AMR][1000 genomes]
rs73765285	1.00[AMR][1000 genomes]
rs73768446	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113846800-113850600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:113846800-113851800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr6:113847600-113848200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:113847600-113848400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:113847600-113848400	Enhancers	NHEK	skin
6	chr6:113847600-113849000	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr6:113847600-113849200	Enhancers	HMEC	breast
8	chr6:113847800-113848400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:113847800-113848800	Enhancers	Skeletal Muscle Male	skeletal muscle
10	chr6:113847800-113851000	Enhancers	Fetal Heart	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links