Variant report

Variant	rs73765277
Chromosome Location	chr6:113890011-113890012
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs55634095	1.00[AMR][1000 genomes]
rs56235437	1.00[AMR][1000 genomes]
rs59948514	1.00[AMR][1000 genomes]
rs73765220	1.00[AMR][1000 genomes]
rs73765246	1.00[AMR][1000 genomes]
rs73765248	1.00[AMR][1000 genomes]
rs73765255	1.00[AMR][1000 genomes]
rs73765270	1.00[AMR][1000 genomes]
rs73765276	1.00[AMR][1000 genomes]
rs73765279	1.00[AMR][1000 genomes]
rs73765281	1.00[AMR][1000 genomes]
rs73765282	1.00[AMR][1000 genomes]
rs73765284	1.00[AMR][1000 genomes]
rs73765285	1.00[AMR][1000 genomes]
rs73768446	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113886200-113892400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:113886400-113895400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:113886800-113891000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr6:113886800-113891400	Weak transcription	Fetal Lung	lung
5	chr6:113886800-113891400	Weak transcription	Osteobl	bone
6	chr6:113887000-113891200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:113887200-113891200	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr6:113887200-113891400	Weak transcription	Adipose Nuclei	Adipose
9	chr6:113887400-113891200	Weak transcription	Rectal Smooth Muscle	rectum
10	chr6:113887400-113891400	Weak transcription	NHLF	lung
11	chr6:113887800-113891800	Weak transcription	NHDF-Ad	bronchial
12	chr6:113887800-113895400	Weak transcription	Colon Smooth Muscle	Colon

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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