Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10485155	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1323323	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17062751	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17062755	1.00[ASN][1000 genomes]
rs17062767	1.00[ASN][1000 genomes]
rs17062783	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17062790	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17062798	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17062815	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17062821	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17062832	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57857547	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58009634	0.90[ASN][1000 genomes]
rs59489488	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60294591	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6907624	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73773668	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73776704	0.90[ASN][1000 genomes]
rs73776712	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73776716	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73776723	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7746823	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7753057	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9493730	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830812	chr6:133993897-134165407	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134059400-134066800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr6:134061400-134063200	Enhancers	Fetal Muscle Leg	muscle
3	chr6:134061600-134063200	Enhancers	HSMM	muscle
4	chr6:134062000-134063200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr6:134062200-134063200	Enhancers	HSMMtube	muscle
6	chr6:134062400-134063400	Enhancers	Fetal Stomach	stomach
7	chr6:134062400-134063600	Enhancers	Fetal Lung	lung
8	chr6:134062800-134063400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:134062800-134066800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr6:134063000-134063200	Enhancers	K562	blood
11	chr6:134063000-134063600	Enhancers	Hela-S3	cervix
12	chr6:134063000-134064800	Weak transcription	Ovary	ovary
13	chr6:134063000-134065000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:134063000-134066200	Weak transcription	A549	lung
15	chr6:134063000-134066600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr6:134063000-134066600	Weak transcription	Osteobl	bone
17	chr6:134063000-134069800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr6:134063000-134070800	Weak transcription	Right Atrium	heart
19	chr6:134063000-134073000	Weak transcription	Fetal Kidney	kidney

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