The 2.0 version of rSNPBase

Variant report

Variant rs73777435
Chromosome Location chr5:100224175-100224176
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:100191200-100224400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr5:100191200-100225200 Weak transcription Fetal Lung lung
3 chr5:100200200-100234400 Weak transcription Fetal Brain Male brain
4 chr5:100207600-100225000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr5:100208000-100235800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr5:100209600-100225600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr5:100214000-100224400 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr5:100217000-100225000 Weak transcription Duodenum Mucosa Duodenum
9 chr5:100217400-100224400 ZNF genes & repeats GM12878-XiMat blood
10 chr5:100218800-100224200 Strong transcription Primary monocytes fromperipheralblood blood
11 chr5:100218800-100225000 Weak transcription Adipose Nuclei Adipose
12 chr5:100218800-100225800 Weak transcription Placenta Placenta
13 chr5:100219000-100233400 Weak transcription Brain Germinal Matrix brain
14 chr5:100219200-100226200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:100219600-100225000 Weak transcription Thymus Thymus
16 chr5:100220200-100224600 Genic enhancers Dnd41 blood
17 chr5:100220400-100224600 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr5:100220800-100224200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr5:100220800-100224800 Weak transcription Primary hematopoietic stem cells blood
20 chr5:100220800-100225400 Weak transcription HUVEC blood vessel
21 chr5:100221800-100225000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr5:100222200-100229600 Weak transcription Primary T cells fromperipheralblood blood
23 chr5:100222400-100225000 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr5:100222400-100226000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr5:100222400-100228000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr5:100222600-100225000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr5:100222800-100225000 Enhancers Primary B cells from cord blood blood
28 chr5:100222800-100225000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr5:100223000-100224800 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr5:100223000-100225000 Enhancers Primary T cells from cord blood blood
31 chr5:100223000-100225000 Enhancers Primary T helper cells PMA-I stimulated --
32 chr5:100223000-100225000 Enhancers Primary T helper cells fromperipheralblood blood
33 chr5:100223200-100224600 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr5:100223200-100229600 Weak transcription Fetal Thymus thymus
35 chr5:100223400-100224200 Genic enhancers Primary B cells from peripheral blood blood
36 chr5:100223400-100225000 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr5:100223600-100225000 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr5:100223600-100228200 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr5:100223800-100224200 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr5:100223800-100224800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr5:100224000-100224200 Enhancers Colonic Mucosa Colon
42 chr5:100224000-100224800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015