Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr6:150282877-150283224	K562	blood:	n/a	n/a
2	TCF12	chr6:150283011-150283221	GM12878	blood:	n/a	chr6:150283041-150283051
3	CTCF	chr6:150282735-150283232	A549	lung:	n/a	n/a
4	CTCF	chr6:150282825-150283237	A549	lung:	n/a	n/a
5	CTCF	chr6:150283180-150283330	GM12874	blood:	n/a	n/a
6	CTCF	chr6:150283140-150283290	HVMF	connective:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:150281675..150283348-chr6:150283536..150287148,3	MCF-7	breast:
2	chr6:150276072..150278660-chr6:150282863..150284944,2	K562	blood:
3	chr6:150281848..150284809-chr6:150294278..150296186,2	MCF-7	breast:

Variant related genes	Relation type
ULBP1	TF binding region
ENSG00000111981	Chromatin interaction

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11961510	1.00[EUR][1000 genomes]
rs11961527	1.00[EUR][1000 genomes]
rs11963771	1.00[EUR][1000 genomes]
rs11968728	1.00[EUR][1000 genomes]
rs4394226	1.00[EUR][1000 genomes]
rs55771808	0.87[AMR][1000 genomes]
rs55906906	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55923313	1.00[EUR][1000 genomes]
rs56228548	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57907635	1.00[EUR][1000 genomes]
rs61034772	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6557197	1.00[EUR][1000 genomes]
rs6918946	1.00[EUR][1000 genomes]
rs6930105	1.00[EUR][1000 genomes]
rs73779705	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73779710	0.87[AMR][1000 genomes]
rs73782154	1.00[EUR][1000 genomes]
rs73782157	1.00[EUR][1000 genomes]
rs73782159	1.00[EUR][1000 genomes]
rs73782166	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73782167	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73782170	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7756662	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7766021	1.00[EUR][1000 genomes]
rs7770995	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886764	chr6:150114745-150393683	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv517022	chr6:150145001-150426272	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv886765	chr6:150198491-150288722	Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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