Variant report

Variant rs73780327
Chromosome Location chr5:115870028-115870029
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115858400-115873600 Enhancers iPS-15b Cell Line embryonic stem cell
2 chr5:115860000-115872000 Enhancers HUES48 Cell Line embryonic stem cell
3 chr5:115860000-115872200 Enhancers HepG2 liver
4 chr5:115861000-115870400 Enhancers iPS-18 Cell Line embryonic stem cell
5 chr5:115864400-115870200 Weak transcription Left Ventricle heart
6 chr5:115864600-115870800 Enhancers Fetal Intestine Large intestine
7 chr5:115864600-115871600 Enhancers Fetal Intestine Small intestine
8 chr5:115864600-115872200 Weak transcription Fetal Brain Male brain
9 chr5:115864800-115872000 Enhancers Brain Substantia Nigra brain
10 chr5:115865600-115870200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr5:115865600-115871600 Weak transcription Brain Germinal Matrix brain
12 chr5:115866400-115873200 Enhancers Fetal Muscle Leg muscle
13 chr5:115867000-115870600 Enhancers Rectal Mucosa Donor 31 rectum
14 chr5:115867000-115871400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
15 chr5:115867400-115872000 Enhancers H1 Cell Line embryonic stem cell
16 chr5:115867400-115872000 Enhancers HUES64 Cell Line embryonic stem cell
17 chr5:115867600-115873200 Enhancers Colon Smooth Muscle Colon
18 chr5:115867800-115870800 Weak transcription Lung lung
19 chr5:115868000-115870200 Enhancers Fetal Kidney kidney
20 chr5:115868000-115872800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr5:115868000-115873200 Enhancers Stomach Smooth Muscle stomach
22 chr5:115868200-115872000 Enhancers Brain Angular Gyrus brain
23 chr5:115868200-115873200 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr5:115868400-115871000 Enhancers Small Intestine intestine
25 chr5:115868400-115871200 Enhancers Brain Inferior Temporal Lobe brain
26 chr5:115868400-115871600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:115868400-115871800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
28 chr5:115868400-115871800 Enhancers Brain Hippocampus Middle brain
29 chr5:115868400-115873000 Enhancers Fetal Lung lung
30 chr5:115868600-115870200 Enhancers Rectal Smooth Muscle rectum
31 chr5:115868600-115871600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr5:115868600-115871800 Enhancers Cortex derived primary cultured neurospheres brain
33 chr5:115868600-115871800 Enhancers Brain Cingulate Gyrus brain
34 chr5:115868600-115876000 Weak transcription Psoas Muscle Psoas
35 chr5:115868800-115870800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr5:115868800-115872200 Weak transcription Fetal Brain Female brain
37 chr5:115868800-115872200 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr5:115869000-115870200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
39 chr5:115869000-115871400 Enhancers ES-WA7 Cell Line embryonic stem cell
40 chr5:115869000-115873400 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr5:115869200-115870400 Enhancers H9 Cell Line embryonic stem cell
42 chr5:115869200-115870400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr5:115869200-115872000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr5:115869200-115873200 Weak transcription Fetal Heart heart
45 chr5:115869400-115870200 Weak transcription Brain Anterior Caudate brain
46 chr5:115869400-115870200 Enhancers Colonic Mucosa Colon
47 chr5:115869400-115870200 Enhancers Gastric stomach
48 chr5:115869400-115871000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr5:115869400-115871000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
50 chr5:115869400-115871000 Enhancers Pancreas Pancrea

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