Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1494822	1.00[EUR][1000 genomes]
rs17141270	1.00[EUR][1000 genomes]
rs17141468	1.00[EUR][1000 genomes]
rs56051865	1.00[EUR][1000 genomes]
rs56303308	1.00[EUR][1000 genomes]
rs56323145	1.00[EUR][1000 genomes]
rs56357276	1.00[EUR][1000 genomes]
rs57997641	1.00[EUR][1000 genomes]
rs60290895	1.00[EUR][1000 genomes]
rs60726905	1.00[EUR][1000 genomes]
rs61213955	1.00[EUR][1000 genomes]
rs61215989	1.00[EUR][1000 genomes]
rs73266768	1.00[EUR][1000 genomes]
rs73266798	1.00[EUR][1000 genomes]
rs73783719	1.00[EUR][1000 genomes]
rs73783720	1.00[EUR][1000 genomes]
rs73783721	1.00[EUR][1000 genomes]
rs73783729	1.00[EUR][1000 genomes]
rs73783750	1.00[EUR][1000 genomes]
rs73783752	1.00[EUR][1000 genomes]
rs73783753	1.00[EUR][1000 genomes]
rs7705339	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015741	chr5:116525936-116665270	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:116576000-116581000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr5:116579800-116581400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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