Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs4130062	1.00[EUR][1000 genomes]
rs56340351	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57300813	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57708845	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58191131	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60854259	1.00[EUR][1000 genomes]
rs61298019	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62240202	0.89[ASN][1000 genomes]
rs62240203	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62240204	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6768423	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817418	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817420	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817436	1.00[EUR][1000 genomes]
rs73817437	1.00[EUR][1000 genomes]
rs73817438	0.98[EUR][1000 genomes]
rs73817442	1.00[EUR][1000 genomes]
rs73817444	1.00[EUR][1000 genomes]
rs73817453	0.94[EUR][1000 genomes]
rs7610587	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7616199	1.00[EUR][1000 genomes]
rs7624278	0.82[EUR][1000 genomes]
rs7639295	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7645014	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9824023	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1807571	chr3:18017246-18057347	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18019200-18031200	Enhancers	Primary hematopoietic stem cells	blood
2	chr3:18022400-18029600	Enhancers	Thymus	Thymus
3	chr3:18025400-18032800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr3:18025600-18029800	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr3:18027200-18029400	Enhancers	Colon Smooth Muscle	Colon
6	chr3:18027600-18029600	Enhancers	Fetal Thymus	thymus
7	chr3:18027800-18029200	Enhancers	Fetal Stomach	stomach
8	chr3:18028000-18031400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr3:18028600-18029200	Flanking Active TSS	Dnd41	blood

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