Variant report

Variant	rs7639295
Chromosome Location	chr3:18077057-18077058
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:18075093..18077944-chr3:18081662..18084069,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs4130062	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56340351	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57300813	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57708845	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58191131	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60854259	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61298019	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62240203	0.98[EUR][1000 genomes]
rs62240204	0.98[EUR][1000 genomes]
rs6768423	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817415	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817418	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817420	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817436	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817437	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817438	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73817442	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817444	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817453	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7610587	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7616199	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7624278	0.82[EUR][1000 genomes]
rs7645014	1.00[CEU][hapmap];0.90[GIH][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9824023	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3388067	chr3:18073748-18077546	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18055000-18088000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr3:18075600-18077200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr3:18075800-18078200	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr3:18076400-18078200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr3:18076800-18078000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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