Variant report

Variant	rs73817420
Chromosome Location	chr3:18061979-18061980
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:18061325..18062831-chr3:18064758..18067192,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs4130062	1.00[EUR][1000 genomes]
rs56340351	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57300813	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57708845	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58191131	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60854259	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61298019	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62240202	0.89[ASN][1000 genomes]
rs62240203	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62240204	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6768423	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817415	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817418	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817436	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817437	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817438	0.98[EUR][1000 genomes]
rs73817442	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817444	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73817453	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7610587	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7616199	1.00[EUR][1000 genomes]
rs7624278	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7639295	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7645014	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9824023	0.94[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18046200-18076600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:18055000-18088000	Weak transcription	Primary hematopoietic stem cells	blood
3	chr3:18058800-18062200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr3:18059800-18062000	Enhancers	Fetal Thymus	thymus
5	chr3:18060800-18062200	Enhancers	Dnd41	blood
6	chr3:18061000-18062000	Bivalent Enhancer	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr3:18061200-18062000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
8	chr3:18061600-18062200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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