Variant report

Variant	rs73817453
Chromosome Location	chr3:18117165-18117166
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:17982287..17984361-chr3:18116779..18119746,2	MCF-7	breast:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs4130062	0.94[EUR][1000 genomes]
rs56340351	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs57300813	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs57708845	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs58191131	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs60854259	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61298019	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62240203	0.93[EUR][1000 genomes]
rs62240204	0.93[EUR][1000 genomes]
rs6768423	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73817415	0.94[EUR][1000 genomes]
rs73817418	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73817420	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73817436	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73817437	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73817438	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73817442	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73817444	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7610587	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7616199	0.94[EUR][1000 genomes]
rs7624278	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7639295	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7645014	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9824023	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:18102200-18127200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:18105600-18117800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr3:18106200-18118800	Weak transcription	Primary hematopoietic stem cells	blood
4	chr3:18109600-18121200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr3:18109800-18117400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr3:18109800-18118600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr3:18111800-18117200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr3:18112000-18117600	Weak transcription	NHDF-Ad	bronchial
9	chr3:18112200-18117600	Weak transcription	Fetal Heart	heart
10	chr3:18114000-18127200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr3:18114200-18117800	Weak transcription	Fetal Thymus	thymus
12	chr3:18114400-18117200	Weak transcription	Dnd41	blood
13	chr3:18115600-18117400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr3:18117000-18117200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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