Variant report

Variant	rs73908329
Chromosome Location	chr21:39992696-39992697
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:39990350..39993337-chr21:39996090..39997790,2	MCF-7	breast:
2	chr21:39991146..39992794-chr21:39993901..39996055,2	K562	blood:

rs_ID	r²[population]
rs16996585	0.83[AFR][1000 genomes]
rs2155717	0.89[AFR][1000 genomes]
rs2186921	0.89[AFR][1000 genomes]
rs2836556	0.89[AFR][1000 genomes]
rs2836557	0.89[AFR][1000 genomes]
rs2836558	0.89[AFR][1000 genomes]
rs2836559	0.89[AFR][1000 genomes]
rs2836560	0.89[AFR][1000 genomes]
rs2836561	0.89[AFR][1000 genomes]
rs2836562	0.89[AFR][1000 genomes]
rs2836563	0.83[AFR][1000 genomes]
rs2836564	0.89[AFR][1000 genomes]
rs2836567	0.89[AFR][1000 genomes]
rs2836568	0.89[AFR][1000 genomes]
rs2836570	0.89[AFR][1000 genomes]
rs2836572	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2836573	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2836574	0.83[AFR][1000 genomes]
rs2836577	0.80[AFR][1000 genomes]
rs2898356	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs35071751	0.83[AMR][1000 genomes]
rs35379792	0.91[AFR][1000 genomes]
rs56262750	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs58779165	0.81[AFR][1000 genomes]
rs60509736	0.89[AFR][1000 genomes]
rs61121259	0.83[AFR][1000 genomes]
rs6517473	0.89[AFR][1000 genomes]
rs7278530	0.89[AFR][1000 genomes]
rs7278549	0.89[AFR][1000 genomes]
rs7281963	0.89[AFR][1000 genomes]
rs73432161	0.89[AFR][1000 genomes]
rs73432179	0.89[AFR][1000 genomes]
rs73432180	0.89[AFR][1000 genomes]
rs73442412	0.83[AFR][1000 genomes]
rs73442433	0.83[AFR][1000 genomes]
rs73906359	0.89[AFR][1000 genomes]
rs73908326	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73908330	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs8128691	0.89[AFR][1000 genomes]
rs8128701	0.89[AFR][1000 genomes]
rs8130668	0.89[AFR][1000 genomes]
rs8133674	0.87[AFR][1000 genomes]

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:39989200-39997600	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr21:39991400-39993400	Enhancers	Osteobl	bone
3	chr21:39991600-39993200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr21:39991600-39993400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr21:39991800-39992800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr21:39991800-39992800	Enhancers	HMEC	breast
7	chr21:39991800-39993200	Weak transcription	Aorta	Aorta
8	chr21:39992000-39992800	Enhancers	Adipose Nuclei	Adipose
9	chr21:39992600-39992800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr21:39992600-39994200	Enhancers	Fetal Muscle Leg	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links