Variant report

Variant rs73934698
Chromosome Location chr19:52406322-52406323
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52348800-52406800 ZNF genes & repeats Liver Liver
2 chr19:52357800-52407400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:52358200-52407400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
4 chr19:52366800-52406600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:52373200-52406400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
6 chr19:52388400-52406800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
7 chr19:52388400-52407200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
8 chr19:52388800-52406800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
9 chr19:52390000-52406400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr19:52390000-52406800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
11 chr19:52390200-52406400 ZNF genes & repeats Brain Substantia Nigra brain
12 chr19:52390400-52407000 ZNF genes & repeats Primary B cells from peripheral blood blood
13 chr19:52390600-52407000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
14 chr19:52390800-52406600 ZNF genes & repeats Fetal Brain Female brain
15 chr19:52390800-52406800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
16 chr19:52390800-52407400 ZNF genes & repeats GM12878-XiMat blood
17 chr19:52391400-52406600 ZNF genes & repeats Primary hematopoietic stem cells blood
18 chr19:52391400-52406600 ZNF genes & repeats Fetal Muscle Leg muscle
19 chr19:52391400-52406600 ZNF genes & repeats HMEC breast
20 chr19:52391400-52406800 ZNF genes & repeats Duodenum Mucosa Duodenum
21 chr19:52391600-52406800 ZNF genes & repeats Primary B cells from cord blood blood
22 chr19:52391800-52406600 ZNF genes & repeats Primary T cells from cord blood blood
23 chr19:52391800-52406600 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
24 chr19:52391800-52406800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr19:52391800-52407200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
26 chr19:52392200-52406800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
27 chr19:52392400-52406600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
28 chr19:52392400-52407000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr19:52392600-52406400 ZNF genes & repeats Ovary ovary
30 chr19:52392600-52406800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
31 chr19:52393600-52406400 ZNF genes & repeats Small Intestine intestine
32 chr19:52393600-52406600 ZNF genes & repeats Primary T cells fromperipheralblood blood
33 chr19:52393800-52406800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr19:52393800-52406800 ZNF genes & repeats Fetal Intestine Small intestine
35 chr19:52393800-52406800 ZNF genes & repeats Lung lung
36 chr19:52393800-52406800 ZNF genes & repeats Thymus Thymus
37 chr19:52395000-52406400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr19:52398800-52406600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
39 chr19:52399200-52406400 ZNF genes & repeats Brain Inferior Temporal Lobe brain
40 chr19:52401200-52407400 ZNF genes & repeats Fetal Thymus thymus
41 chr19:52401800-52406800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr19:52402600-52406400 ZNF genes & repeats Fetal Lung lung
43 chr19:52403000-52406800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
44 chr19:52403000-52407000 Weak transcription Placenta Amnion Placenta Amnion
45 chr19:52403200-52407000 Weak transcription HUVEC blood vessel
46 chr19:52403200-52407000 Weak transcription Osteobl bone
47 chr19:52403600-52406800 ZNF genes & repeats Fetal Stomach stomach
48 chr19:52403800-52406400 Weak transcription Pancreas Pancrea
49 chr19:52404000-52406600 Weak transcription Psoas Muscle Psoas
50 chr19:52404000-52407000 ZNF genes & repeats Fetal Intestine Large intestine

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