Variant report

Variant	rs57718486
Chromosome Location	chr19:52452321-52452322
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr19:52452316-52452420	K562	blood:	n/a	n/a
2	ELF1	chr19:52452122-52452537	K562	blood:	n/a	chr19:52452331-52452342 chr19:52452330-52452343
3	ELF1	chr19:52452240-52452565	GM12878	blood:	n/a	chr19:52452331-52452342 chr19:52452330-52452343

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:52452317-52452367	Jurkat	blood:	n/a
2	chr19:52452317-52452367	BE2_C	brain:	n/a
3	chr19:52452317-52452367	Hepatocyte	liver:	n/a
4	chr19:52452317-52452367	T-47D	breast:	n/a
5	chr19:52452317-52452367	LNCaP	prostate:	n/a
6	chr19:52452317-52452367	Hela-S3	cervix:	n/a
7	chr19:52452317-52452367	HUVEC	blood vessel:	n/a
8	chr19:52452317-52452367	NHBE	bronchial:	n/a
9	chr19:52452317-52452367	HCT-116	colon:	n/a
10	chr19:52452317-52452367	HPAEpiC	pulmonary alveolar:	n/a
11	chr19:52452317-52452367	SK-N-SH_RA	brain:	n/a
12	chr19:52452317-52452367	NB4	blood:	n/a
13	chr19:52452317-52452367	SKMC	muscle:	n/a
14	chr19:52452317-52452367	HRE	kidney:	n/a
15	chr19:52452317-52452367	AG04450	lung:	fetal
16	chr19:52452317-52452367	AoSMC	blood vessel:	n/a
17	chr19:52452317-52452367	A549	lung:	n/a
18	chr19:52452317-52452367	AG04449	skin:	fetal
19	chr19:52452317-52452367	AG10803	skin:	n/a
20	chr19:52452317-52452367	CMK	blood:	n/a
21	chr19:52452317-52452367	AG09309	skin:	n/a
22	chr19:52452317-52452367	HNPCEpiC	eye:	n/a
23	chr19:52452317-52452367	U87	brain:	n/a
24	chr19:52452317-52452367	MCF10A-Er-Src	breast:	n/a
25	chr19:52452317-52452367	HEK293	kidney:	embryo
26	chr19:52452317-52452367	HRPEpiC	eye:	n/a
27	chr19:52452317-52452367	BJ	skin:	n/a
28	chr19:52452317-52452367	HL-60	blood:	n/a
29	chr19:52452317-52452367	NT2-D1	testis:	n/a
30	chr19:52452317-52452367	GM06990	blood:	n/a
31	chr19:52452317-52452367	K562	blood:	n/a
32	chr19:52452317-52452367	HEEpiC	esophagus:	n/a
33	chr19:52452317-52452367	HCPEpiC	choroid plexus:	n/a
34	chr19:52452317-52452367	SK-N-SH	brain:	n/a
35	chr19:52452317-52452367	PrEC	prostate:	n/a
36	chr19:52452317-52452367	SK-N-MC	brain:	n/a
37	chr19:52452317-52452367	NH-A	brain:	n/a
38	chr19:52452317-52452367	ovcar-3	ovarian:	n/a
39	chr19:52452317-52452367	HAEpiC	amniotic membrane:	n/a
40	chr19:52452317-52452367	GM19239	blood:	n/a
41	chr19:52452317-52452367	IMR90	lung:	fetal
42	chr19:52452317-52452367	GM12878	blood:	n/a
43	chr19:52452317-52452367	NHDF-neo	bronchial:	n/a
44	chr19:52452317-52452367	ProgFib	skin:	n/a
45	chr19:52452317-52452367	GM12891	blood:	n/a
46	chr19:52452317-52452367	GM12892	blood:	n/a
47	chr19:52452317-52452367	Caco-2	colon:	n/a
48	chr19:52452317-52452367	SAEC	small airway:	n/a
49	chr19:52452317-52452367	HRCEpiC	kidney:	n/a
50	chr19:52452317-52452367	RPTEC	kidney:	n/a

No data

Variant related genes	Relation type
HCCAT3	TF binding region
HCCAT3	CpG island

Extended variants
information (count: 90 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10402612	1.00[EUR][1000 genomes]
rs10403324	1.00[EUR][1000 genomes]
rs10422793	1.00[EUR][1000 genomes]
rs10423207	1.00[EUR][1000 genomes]
rs16983219	1.00[EUR][1000 genomes]
rs17856123	1.00[EUR][1000 genomes]
rs28555625	1.00[EUR][1000 genomes]
rs28848301	1.00[EUR][1000 genomes]
rs28873793	1.00[EUR][1000 genomes]
rs28890801	1.00[EUR][1000 genomes]
rs58927826	1.00[EUR][1000 genomes]
rs59534321	1.00[EUR][1000 genomes]
rs59559467	0.89[AFR][1000 genomes]
rs59868090	1.00[EUR][1000 genomes]
rs61002201	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61052454	1.00[EUR][1000 genomes]
rs61393893	1.00[EUR][1000 genomes]
rs6509594	1.00[EUR][1000 genomes]
rs6509601	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6509608	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7247959	1.00[EUR][1000 genomes]
rs7256504	1.00[EUR][1000 genomes]
rs7257221	1.00[EUR][1000 genomes]
rs73934696	1.00[EUR][1000 genomes]
rs73934697	1.00[EUR][1000 genomes]
rs73934698	1.00[EUR][1000 genomes]
rs73934699	1.00[EUR][1000 genomes]
rs73934709	1.00[EUR][1000 genomes]
rs73937804	1.00[EUR][1000 genomes]
rs73937811	0.89[AFR][1000 genomes]
rs8108637	1.00[EUR][1000 genomes]
rs8108819	1.00[EUR][1000 genomes]
rs8109014	1.00[EUR][1000 genomes]
rs8110109	1.00[EUR][1000 genomes]
rs8111193	1.00[EUR][1000 genomes]
rs8111380	1.00[EUR][1000 genomes]
rs8111503	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:53 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758767	chr19:51991896-52604625	Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	578 gene(s)	inside rSNPs	diseases
2	nsv1065410	chr19:52103914-52889530	Genic enhancers Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	596 gene(s)	inside rSNPs	diseases
3	esv34938	chr19:52227916-52630935	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
4	nsv1061029	chr19:52249900-52614747	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
5	esv2757699	chr19:52259571-52604625	Active TSS ZNF genes & repeats Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
6	esv2751797	chr19:52259588-52604625	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
7	nsv1061100	chr19:52259839-52617390	Strong transcription Active TSS ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
8	nsv1060519	chr19:52270087-52628611	Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
9	nsv579998	chr19:52270942-52613105	Strong transcription Active TSS ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
10	nsv1056146	chr19:52271018-52617390	Weak transcription Strong transcription ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
11	nsv1057485	chr19:52271309-52614747	ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
12	nsv870043	chr19:52271348-52619860	Strong transcription Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
13	nsv534202	chr19:52272356-52627403	Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Active TSS ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
14	nsv1059263	chr19:52273257-52607771	ZNF genes & repeats Weak transcription Active TSS Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
15	nsv1057290	chr19:52273257-52614747	ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
16	nsv1064732	chr19:52273257-52617390	ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
17	nsv1059924	chr19:52273257-52628611	Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
18	nsv1057217	chr19:52283498-52617132	Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
19	nsv1062154	chr19:52283498-52617390	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
20	nsv1060988	chr19:52283498-52621644	Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
21	nsv1058292	chr19:52284671-52614747	ZNF genes & repeats Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
22	nsv1063940	chr19:52284671-52617390	ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
23	esv2751798	chr19:52285788-52604625	ZNF genes & repeats Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
24	esv2751799	chr19:52285788-52604625	Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
25	esv2751800	chr19:52285788-52604625	Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
26	esv2751801	chr19:52285788-52604625	ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
27	esv34502	chr19:52285829-52604625	Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
28	nsv458734	chr19:52287452-52601399	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
29	nsv579999	chr19:52287452-52601399	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
30	nsv458735	chr19:52287452-52607765	Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
31	nsv458736	chr19:52287452-52607765	ZNF genes & repeats Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
32	nsv580000	chr19:52287452-52607765	Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
33	nsv1055523	chr19:52288763-52578312	ZNF genes & repeats Weak transcription Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
34	nsv544055	chr19:52288763-52578312	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
35	nsv916346	chr19:52288798-52578302	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
36	nsv1065600	chr19:52295063-52500079	Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
37	nsv544056	chr19:52295063-52500079	Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
38	nsv1059596	chr19:52295063-52553755	ZNF genes & repeats Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
39	nsv544057	chr19:52295063-52553755	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
40	nsv1064316	chr19:52295063-52593062	ZNF genes & repeats Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
41	nsv544058	chr19:52295063-52593062	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
42	nsv580001	chr19:52301660-52517238	Active TSS Strong transcription ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
43	nsv580002	chr19:52304146-52617298	Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
44	nsv458737	chr19:52306547-52601399	Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
45	nsv580003	chr19:52306547-52601399	Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
46	nsv458738	chr19:52306547-52621644	Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
47	nsv580004	chr19:52306547-52621644	ZNF genes & repeats Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
48	nsv531306	chr19:52327602-52616696	ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
49	esv2758505	chr19:52346092-52533826	Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
50	nsv534124	chr19:52368797-52616696	Strong transcription Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:52431400-52453200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr19:52432600-52452800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr19:52432800-52453000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
4	chr19:52433000-52452800	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
5	chr19:52433000-52453000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr19:52433000-52453400	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
7	chr19:52433000-52455400	ZNF genes & repeats	Liver	Liver
8	chr19:52433000-52455400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
9	chr19:52435000-52455800	ZNF genes & repeats	Adipose Nuclei	Adipose
10	chr19:52438400-52453200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr19:52439200-52453400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr19:52439800-52452400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
13	chr19:52443200-52453000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
14	chr19:52443400-52452800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr19:52443400-52453200	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
16	chr19:52443400-52453200	ZNF genes & repeats	Duodenum Mucosa	Duodenum
17	chr19:52445000-52452600	ZNF genes & repeats	Fetal Brain Female	brain
18	chr19:52449600-52468000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr19:52450000-52453200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
20	chr19:52450600-52452800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
21	chr19:52450800-52452800	ZNF genes & repeats	Lung	lung
22	chr19:52451000-52452600	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
23	chr19:52451000-52452800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr19:52451000-52453000	ZNF genes & repeats	Fetal Stomach	stomach
25	chr19:52451600-52453000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr19:52451600-52453000	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
27	chr19:52451600-52453000	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
28	chr19:52451600-52453000	ZNF genes & repeats	Fetal Intestine Small	intestine
29	chr19:52451600-52453000	ZNF genes & repeats	Fetal Muscle Leg	muscle
30	chr19:52451600-52453200	Active TSS	Brain Hippocampus Middle	brain
31	chr19:52451800-52452400	ZNF genes & repeats	Fetal Muscle Trunk	muscle
32	chr19:52451800-52452600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr19:52451800-52452800	Active TSS	Brain Angular Gyrus	brain
34	chr19:52451800-52452800	ZNF genes & repeats	Rectal Smooth Muscle	rectum
35	chr19:52451800-52452800	ZNF genes & repeats	Osteobl	bone
36	chr19:52451800-52453000	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr19:52451800-52453000	Active TSS	Fetal Kidney	kidney
38	chr19:52451800-52453000	ZNF genes & repeats	Right Atrium	heart
39	chr19:52451800-52453000	Active TSS	NHDF-Ad	bronchial
40	chr19:52451800-52453200	Active TSS	Brain Anterior Caudate	brain
41	chr19:52451800-52453200	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
42	chr19:52452000-52452400	Active TSS	Primary T cells from cord blood	blood
43	chr19:52452000-52452400	Weak transcription	Fetal Brain Male	brain
44	chr19:52452000-52452600	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr19:52452000-52452600	ZNF genes & repeats	Left Ventricle	heart
46	chr19:52452000-52452800	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
47	chr19:52452000-52453000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr19:52452000-52453000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr19:52452000-52453000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr19:52452000-52453000	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin

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