Variant report

Variant rs73935207
Chromosome Location chr19:53540286-53540287
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53530000-53540400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr19:53538400-53540400 Enhancers Placenta Placenta
3 chr19:53539400-53540600 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:53539600-53541400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
5 chr19:53539600-53541400 ZNF genes & repeats Duodenum Mucosa Duodenum
6 chr19:53539800-53540400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr19:53539800-53541200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
8 chr19:53539800-53541400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr19:53539800-53541600 Active TSS Fetal Kidney kidney
10 chr19:53539800-53542200 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
11 chr19:53540000-53540600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:53540000-53540600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
13 chr19:53540000-53540800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
14 chr19:53540000-53541000 ZNF genes & repeats Liver Liver
15 chr19:53540000-53541400 Active TSS HUES48 Cell Line embryonic stem cell
16 chr19:53540000-53541400 Active TSS Primary T cells from cord blood blood
17 chr19:53540000-53541400 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
18 chr19:53540000-53541600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr19:53540000-53541600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr19:53540000-53541600 Active TSS Osteobl bone
21 chr19:53540200-53540400 Bivalent/Poised TSS iPS DF 19.11 Cell Line embryonic stem cell
22 chr19:53540200-53540400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr19:53540200-53540400 Enhancers HUVEC blood vessel
24 chr19:53540200-53540600 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
25 chr19:53540200-53540600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
26 chr19:53540200-53540800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr19:53540200-53541400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr19:53540200-53541400 Active TSS HUES6 Cell Line embryonic stem cell
29 chr19:53540200-53541400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr19:53540200-53541400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr19:53540200-53541400 Active TSS Muscle Satellite Cultured Cells --
32 chr19:53540200-53541400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
33 chr19:53540200-53541400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr19:53540200-53541400 ZNF genes & repeats Pancreas Pancrea
35 chr19:53540200-53541600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr19:53540200-53541600 Active TSS K562 blood
37 chr19:53540200-53541800 Active TSS HSMM muscle
38 chr19:53540200-53542200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
39 chr19:53540200-53542400 ZNF genes & repeats Adipose Nuclei Adipose

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