The 2.0 version of rSNPBase

Variant report

Variant rs74025864
Chromosome Location chr15:75287504-75287505
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:75283400-75287600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr15:75286400-75287800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
3 chr15:75286600-75287600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
4 chr15:75286600-75287600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr15:75286600-75287600 Flanking Active TSS Brain Germinal Matrix brain
6 chr15:75286600-75288400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
7 chr15:75286600-75289000 Active TSS Brain Substantia Nigra brain
8 chr15:75286600-75289600 Active TSS Pancreatic Islets Pancreatic Islet
9 chr15:75286800-75288600 Active TSS Brain Cingulate Gyrus brain
10 chr15:75286800-75288800 Active TSS Brain Angular Gyrus brain
11 chr15:75287000-75287600 Flanking Active TSS Brain Anterior Caudate brain
12 chr15:75287000-75287600 Flanking Active TSS Fetal Brain Male brain
13 chr15:75287000-75288600 Active TSS Brain Hippocampus Middle brain
14 chr15:75287200-75287600 Flanking Active TSS Fetal Brain Female brain
15 chr15:75287200-75288000 Active TSS Sigmoid Colon Sigmoid Colon
16 chr15:75287200-75288000 Active TSS Stomach Smooth Muscle stomach
17 chr15:75287200-75288200 Active TSS Duodenum Smooth Muscle Duodenum
18 chr15:75287200-75288600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
19 chr15:75287200-75289800 Active TSS H9 Cell Line embryonic stem cell
20 chr15:75287400-75287600 Flanking Active TSS H1 Cell Line embryonic stem cell
21 chr15:75287400-75287600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr15:75287400-75287600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
23 chr15:75287400-75287600 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
24 chr15:75287400-75287600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
25 chr15:75287400-75287600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr15:75287400-75287600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr15:75287400-75287600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
28 chr15:75287400-75287600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
29 chr15:75287400-75287600 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr15:75287400-75287600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
31 chr15:75287400-75287600 Active TSS Primary T regulatory cells fromperipheralblood blood
32 chr15:75287400-75287600 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr15:75287400-75287600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
34 chr15:75287400-75287600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr15:75287400-75287600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
36 chr15:75287400-75287600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr15:75287400-75287600 Flanking Active TSS Fetal Intestine Large intestine
38 chr15:75287400-75287600 Flanking Active TSS Fetal Intestine Small intestine
39 chr15:75287400-75287600 Flanking Active TSS Fetal Kidney kidney
40 chr15:75287400-75287600 Flanking Active TSS Fetal Muscle Trunk muscle
41 chr15:75287400-75287600 Bivalent Enhancer Fetal Muscle Leg muscle
42 chr15:75287400-75287600 Bivalent Enhancer Fetal Thymus thymus
43 chr15:75287400-75287600 Flanking Active TSS Pancreas Pancrea
44 chr15:75287400-75287600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
45 chr15:75287400-75287600 Flanking Active TSS Right Ventricle heart
46 chr15:75287400-75287600 Flanking Active TSS A549 lung
47 chr15:75287400-75287600 Flanking Active TSS Hela-S3 cervix
48 chr15:75287400-75287600 Flanking Active TSS HepG2 liver
49 chr15:75287400-75287800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr15:75287400-75287800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015