The 2.0 version of rSNPBase

Variant report

Variant rs74078326
Chromosome Location chr1:59255092-59255093
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59251400-59256000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:59251400-59275000 Weak transcription Ovary ovary
3 chr1:59251400-59279200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:59251600-59256000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:59251600-59256800 Weak transcription Esophagus oesophagus
6 chr1:59251600-59260000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:59251600-59261400 Weak transcription Psoas Muscle Psoas
8 chr1:59251800-59255200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:59251800-59260000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr1:59251800-59261400 Weak transcription Left Ventricle heart
11 chr1:59251800-59264400 Weak transcription Brain Cingulate Gyrus brain
12 chr1:59251800-59265000 Weak transcription Stomach Mucosa stomach
13 chr1:59251800-59277200 Weak transcription Primary T cells fromperipheralblood blood
14 chr1:59251800-59278200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:59252000-59256200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr1:59252000-59257000 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr1:59252200-59258600 Weak transcription Right Ventricle heart
18 chr1:59252200-59264400 Weak transcription Brain Hippocampus Middle brain
19 chr1:59252600-59257600 Weak transcription HSMM muscle
20 chr1:59252600-59258600 Weak transcription Fetal Heart heart
21 chr1:59252600-59258600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:59252800-59260800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:59252800-59268600 Weak transcription Pancreas Pancrea
24 chr1:59253000-59278000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:59253200-59256200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:59254000-59281000 Weak transcription Brain Substantia Nigra brain
27 chr1:59254400-59256000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr1:59254400-59260600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:59254400-59271600 Weak transcription Primary T cells from cord blood blood
30 chr1:59254600-59260400 Weak transcription Primary B cells from peripheral blood blood
31 chr1:59254800-59256800 Enhancers NHEK skin
32 chr1:59254800-59260000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:59255000-59255400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:59255000-59255800 Enhancers Placenta Amnion Placenta Amnion
35 chr1:59255000-59255800 Enhancers Hela-S3 cervix
36 chr1:59255000-59256600 Enhancers HSMMtube muscle
37 chr1:59255000-59256800 Weak transcription Primary B cells from cord blood blood
38 chr1:59255000-59257200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015