Variant report

Variant	rs74134210
Chromosome Location	chr1:185889902-185889903
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:185886123..185888425-chr1:185889040..185891256,2	K562	blood:

Extended variants
information (count: 103 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:101)

rs_ID	r²[population]
rs10489716	1.00[EUR][1000 genomes]
rs12079734	1.00[EUR][1000 genomes]
rs1407428	1.00[EUR][1000 genomes]
rs16824455	1.00[EUR][1000 genomes]
rs16824458	1.00[EUR][1000 genomes]
rs16824488	1.00[EUR][1000 genomes]
rs16824497	1.00[EUR][1000 genomes]
rs1830622	1.00[EUR][1000 genomes]
rs1830623	1.00[EUR][1000 genomes]
rs1853247	1.00[EUR][1000 genomes]
rs2170858	1.00[EUR][1000 genomes]
rs28477118	1.00[EUR][1000 genomes]
rs28510615	1.00[EUR][1000 genomes]
rs55731570	1.00[EUR][1000 genomes]
rs55780908	1.00[AMR][1000 genomes]
rs55887884	1.00[EUR][1000 genomes]
rs56100961	1.00[EUR][1000 genomes]
rs56327694	1.00[AMR][1000 genomes]
rs56331179	1.00[EUR][1000 genomes]
rs56347630	1.00[EUR][1000 genomes]
rs56881574	1.00[EUR][1000 genomes]
rs57036166	1.00[EUR][1000 genomes]
rs57107751	1.00[EUR][1000 genomes]
rs57162167	1.00[EUR][1000 genomes]
rs57215320	1.00[EUR][1000 genomes]
rs57246058	1.00[EUR][1000 genomes]
rs57257586	1.00[EUR][1000 genomes]
rs57646829	1.00[EUR][1000 genomes]
rs57782754	1.00[EUR][1000 genomes]
rs58433773	1.00[EUR][1000 genomes]
rs58610741	1.00[EUR][1000 genomes]
rs59175860	1.00[EUR][1000 genomes]
rs59660733	1.00[EUR][1000 genomes]
rs59967839	1.00[EUR][1000 genomes]
rs60308365	1.00[EUR][1000 genomes]
rs60458315	1.00[EUR][1000 genomes]
rs60735946	1.00[EUR][1000 genomes]
rs61679640	1.00[EUR][1000 genomes]
rs61689983	1.00[EUR][1000 genomes]
rs6425004	1.00[EUR][1000 genomes]
rs6425005	1.00[EUR][1000 genomes]
rs6671094	1.00[EUR][1000 genomes]
rs6675691	1.00[EUR][1000 genomes]
rs6676349	1.00[EUR][1000 genomes]
rs6676522	1.00[EUR][1000 genomes]
rs6677183	1.00[EUR][1000 genomes]
rs6688298	1.00[EUR][1000 genomes]
rs6689228	1.00[EUR][1000 genomes]
rs6689359	1.00[EUR][1000 genomes]
rs6690475	1.00[EUR][1000 genomes]
rs6690559	1.00[EUR][1000 genomes]
rs6690714	1.00[EUR][1000 genomes]
rs6700856	1.00[EUR][1000 genomes]
rs6703750	1.00[EUR][1000 genomes]
rs73054432	1.00[EUR][1000 genomes]
rs73054448	1.00[EUR][1000 genomes]
rs73060487	1.00[EUR][1000 genomes]
rs73062512	1.00[EUR][1000 genomes]
rs73062516	1.00[EUR][1000 genomes]
rs73070519	1.00[EUR][1000 genomes]
rs73070522	1.00[EUR][1000 genomes]
rs73070527	1.00[EUR][1000 genomes]
rs73070547	1.00[EUR][1000 genomes]
rs73070548	1.00[EUR][1000 genomes]
rs73070567	1.00[EUR][1000 genomes]
rs73070598	1.00[EUR][1000 genomes]
rs73072012	1.00[EUR][1000 genomes]
rs73072023	1.00[EUR][1000 genomes]
rs73072049	1.00[EUR][1000 genomes]
rs73072063	1.00[EUR][1000 genomes]
rs73072067	1.00[EUR][1000 genomes]
rs74134207	1.00[EUR][1000 genomes]
rs74134211	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74134213	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74134214	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74134216	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74134221	1.00[AMR][1000 genomes]
rs74134222	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74134224	1.00[AMR][1000 genomes]
rs74134225	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74134226	1.00[AMR][1000 genomes]
rs74134228	1.00[AMR][1000 genomes]
rs74134229	1.00[AMR][1000 genomes]
rs74134230	1.00[AMR][1000 genomes]
rs74134232	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74134265	1.00[EUR][1000 genomes]
rs74134306	1.00[EUR][1000 genomes]
rs74135337	1.00[EUR][1000 genomes]
rs74135346	1.00[EUR][1000 genomes]
rs74135350	1.00[EUR][1000 genomes]
rs74135351	1.00[EUR][1000 genomes]
rs74135359	1.00[EUR][1000 genomes]
rs74135362	1.00[EUR][1000 genomes]
rs74135365	1.00[EUR][1000 genomes]
rs7517811	1.00[EUR][1000 genomes]
rs7540727	1.00[EUR][1000 genomes]
rs7540773	1.00[EUR][1000 genomes]
rs7544162	1.00[EUR][1000 genomes]
rs7544394	1.00[EUR][1000 genomes]
rs7544808	1.00[EUR][1000 genomes]
rs959689	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv548398	chr1:185136458-186003094	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
2	esv3424090	chr1:185679718-186270877	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:185875600-185895800	Weak transcription	NHDF-Ad	bronchial
2	chr1:185877000-185894200	Weak transcription	Fetal Lung	lung
3	chr1:185877800-185904400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr1:185881600-185898800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr1:185882000-185894800	Weak transcription	Aorta	Aorta
6	chr1:185883000-185907800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr1:185883200-185907400	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr1:185883600-185906600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr1:185884800-185890800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr1:185887000-185890400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr1:185887800-185891400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr1:185888400-185890400	Enhancers	Brain Germinal Matrix	brain

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