Variant report

Variant	rs74139703
Chromosome Location	chr1:226764213-226764214
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:226762291..226765130-chr1:226766414..226768720,3	K562	blood:
2	chr1:226763403..226765130-chr1:226766414..226768252,2	K562	blood:
3	chr1:226670505..226672311-chr1:226763715..226765421,2	K562	blood:

rs_ID	r²[population]
rs2126331	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55646582	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61527478	1.00[EUR][1000 genomes]
rs665165	1.00[EUR][1000 genomes]
rs708748	1.00[EUR][1000 genomes]
rs708749	1.00[EUR][1000 genomes]
rs74139705	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74141937	1.00[EUR][1000 genomes]
rs74141941	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:226756600-226764400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr1:226756600-226764600	Weak transcription	Brain Substantia Nigra	brain
3	chr1:226756600-226764800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr1:226757400-226764800	Weak transcription	Brain Cingulate Gyrus	brain
5	chr1:226757800-226764800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr1:226758400-226765200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr1:226762000-226764800	Enhancers	Brain Hippocampus Middle	brain
8	chr1:226762000-226764800	Enhancers	Rectal Smooth Muscle	rectum
9	chr1:226762200-226765600	Enhancers	Colon Smooth Muscle	Colon
10	chr1:226762400-226764800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr1:226762400-226765000	Enhancers	Fetal Muscle Leg	muscle
12	chr1:226762600-226764400	Enhancers	Stomach Smooth Muscle	stomach
13	chr1:226762600-226765000	Enhancers	Right Atrium	heart
14	chr1:226763000-226765600	Enhancers	Brain Anterior Caudate	brain
15	chr1:226763000-226777200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr1:226763200-226765000	Weak transcription	Fetal Brain Male	brain
17	chr1:226763400-226765200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr1:226763400-226767000	Weak transcription	Ovary	ovary
19	chr1:226763600-226764400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr1:226763600-226765200	Weak transcription	Fetal Brain Female	brain
21	chr1:226763600-226765400	Enhancers	Brain Inferior Temporal Lobe	brain
22	chr1:226764000-226764400	Weak transcription	Primary hematopoietic stem cells	blood
23	chr1:226764000-226765200	Weak transcription	Brain Germinal Matrix	brain
24	chr1:226764000-226765200	Weak transcription	Fetal Muscle Trunk	muscle
25	chr1:226764200-226764400	Enhancers	Cortex derived primary cultured neurospheres	brain
26	chr1:226764200-226764600	Enhancers	Duodenum Smooth Muscle	Duodenum

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