Variant report

Variant	rs2126331
Chromosome Location	chr1:226762184-226762185
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:226750487..226752491-chr1:226760804..226762523,2	MCF-7	breast:
2	chr1:226745080..226747774-chr1:226760113..226762333,2	K562	blood:
3	chr1:226755240..226758570-chr1:226759106..226763916,5	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs2889481	1.00[CEU][hapmap]
rs55646582	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs603609	1.00[CEU][hapmap]
rs61527478	1.00[EUR][1000 genomes]
rs665165	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6691873	1.00[CEU][hapmap]
rs708748	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs708749	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs74139703	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74139705	1.00[EUR][1000 genomes]
rs74141937	1.00[EUR][1000 genomes]
rs74141940	0.98[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs74141941	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:226750000-226763200	Weak transcription	Fetal Intestine Small	intestine
2	chr1:226755600-226762800	Weak transcription	Brain Germinal Matrix	brain
3	chr1:226756200-226762600	Weak transcription	Right Atrium	heart
4	chr1:226756600-226762400	Weak transcription	Right Ventricle	heart
5	chr1:226756600-226762800	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr1:226756600-226764400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr1:226756600-226764600	Weak transcription	Brain Substantia Nigra	brain
8	chr1:226756600-226764800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr1:226756800-226762200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr1:226757200-226763000	Weak transcription	Fetal Brain Female	brain
11	chr1:226757400-226764800	Weak transcription	Brain Cingulate Gyrus	brain
12	chr1:226757800-226764800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr1:226758400-226762600	Weak transcription	Stomach Smooth Muscle	stomach
14	chr1:226758400-226763000	Weak transcription	Brain Anterior Caudate	brain
15	chr1:226758400-226764200	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr1:226758400-226765200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr1:226758600-226762800	Weak transcription	Fetal Brain Male	brain
18	chr1:226760600-226762200	Weak transcription	Colon Smooth Muscle	Colon
19	chr1:226760600-226762200	Weak transcription	Fetal Muscle Trunk	muscle
20	chr1:226760600-226762600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr1:226760800-226763000	Weak transcription	Pancreas	Pancrea
22	chr1:226762000-226762400	Enhancers	Liver	Liver
23	chr1:226762000-226764800	Enhancers	Brain Hippocampus Middle	brain
24	chr1:226762000-226764800	Enhancers	Rectal Smooth Muscle	rectum

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