Variant report

Variant	rs74139705
Chromosome Location	chr1:226765126-226765127
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:226762291..226765130-chr1:226766414..226768720,3	K562	blood:
2	chr1:226763403..226765130-chr1:226766414..226768252,2	K562	blood:
3	chr1:226670505..226672311-chr1:226763715..226765421,2	K562	blood:
4	chr1:226764453..226766070-chr1:226766263..226768045,2	MCF-7	breast:

rs_ID	r²[population]
rs2126331	1.00[EUR][1000 genomes]
rs55646582	1.00[EUR][1000 genomes]
rs61527478	1.00[EUR][1000 genomes]
rs665165	1.00[EUR][1000 genomes]
rs708748	1.00[EUR][1000 genomes]
rs708749	1.00[EUR][1000 genomes]
rs74139703	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74141937	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74141940	0.81[AFR][1000 genomes]
rs74141941	1.00[EUR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:226758400-226765200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr1:226762200-226765600	Enhancers	Colon Smooth Muscle	Colon
3	chr1:226763000-226765600	Enhancers	Brain Anterior Caudate	brain
4	chr1:226763000-226777200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr1:226763400-226765200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr1:226763400-226767000	Weak transcription	Ovary	ovary
7	chr1:226763600-226765200	Weak transcription	Fetal Brain Female	brain
8	chr1:226763600-226765400	Enhancers	Brain Inferior Temporal Lobe	brain
9	chr1:226764000-226765200	Weak transcription	Brain Germinal Matrix	brain
10	chr1:226764000-226765200	Weak transcription	Fetal Muscle Trunk	muscle
11	chr1:226764400-226765400	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr1:226764400-226765600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr1:226764600-226765400	Enhancers	Brain Angular Gyrus	brain
14	chr1:226764600-226765400	Enhancers	Brain Substantia Nigra	brain
15	chr1:226764800-226765400	Enhancers	Brain Cingulate Gyrus	brain
16	chr1:226764800-226765600	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr1:226764800-226765600	Enhancers	Stomach Smooth Muscle	stomach
18	chr1:226764800-226765800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr1:226764800-226765800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr1:226764800-226765800	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr1:226764800-226766000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr1:226765000-226765200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr1:226765000-226765400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr1:226765000-226765400	Weak transcription	Fetal Muscle Leg	muscle
25	chr1:226765000-226765600	Enhancers	HUES64 Cell Line	embryonic stem cell
26	chr1:226765000-226765600	Enhancers	Fetal Brain Male	brain
27	chr1:226765000-226790000	Weak transcription	Right Atrium	heart

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