Variant report

Variant	rs747614
Chromosome Location	chr11:45119181-45119182
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:45111489..45113728-chr11:45118009..45120988,2	K562	blood:

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11038296	1.00[CHD][hapmap]
rs11604720	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11606697	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12363092	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs16938170	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs34937552	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.95[ASN][1000 genomes]
rs56989510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6485590	1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs73464505	0.85[EUR][1000 genomes]
rs73464507	0.95[ASN][1000 genomes]
rs7935386	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45111800-45119200	Weak transcription	Aorta	Aorta
2	chr11:45113800-45123800	Weak transcription	Primary T helper cells fromperipheralblood	blood
3	chr11:45114000-45119200	Weak transcription	Left Ventricle	heart
4	chr11:45114000-45119200	Weak transcription	Pancreas	Pancrea
5	chr11:45114400-45119200	Weak transcription	Right Atrium	heart
6	chr11:45114600-45119400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:45114800-45119200	Weak transcription	Brain Hippocampus Middle	brain
8	chr11:45114800-45121800	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr11:45114800-45124200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr11:45115200-45119200	Weak transcription	Lung	lung
11	chr11:45115200-45119600	Weak transcription	Right Ventricle	heart
12	chr11:45115400-45119200	Weak transcription	Esophagus	oesophagus
13	chr11:45115600-45122000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr11:45116000-45121800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr11:45116200-45120600	Enhancers	Fetal Brain Male	brain
16	chr11:45116600-45119200	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr11:45117000-45124000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr11:45117000-45124000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr11:45117000-45126400	Weak transcription	Thymus	Thymus
20	chr11:45117200-45119200	Weak transcription	Spleen	Spleen
21	chr11:45117400-45122000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
22	chr11:45117800-45119400	Weak transcription	Brain Germinal Matrix	brain
23	chr11:45117800-45120000	Enhancers	Fetal Brain Female	brain
24	chr11:45118000-45120400	Enhancers	NHEK	skin
25	chr11:45118200-45120400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr11:45118200-45120400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr11:45118400-45120400	Enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr11:45118400-45121800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr11:45118600-45120200	Enhancers	HMEC	breast
30	chr11:45119000-45119800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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