Variant report

Variant rs7478880
Chromosome Location chr11:120261791-120261792
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:120232000-120274800 Weak transcription Ovary ovary
2 chr11:120254600-120265000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:120254600-120266400 Weak transcription Gastric stomach
4 chr11:120254600-120271000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr11:120255400-120262200 Weak transcription Right Ventricle heart
6 chr11:120255800-120262000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr11:120256200-120262000 Weak transcription Left Ventricle heart
8 chr11:120256200-120262200 Weak transcription HSMMtube muscle
9 chr11:120256400-120262000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr11:120256600-120261800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr11:120256800-120261800 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr11:120256800-120262000 Weak transcription Psoas Muscle Psoas
13 chr11:120256800-120262000 Weak transcription NH-A brain
14 chr11:120257000-120262000 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr11:120257200-120262200 Weak transcription HSMM muscle
16 chr11:120257400-120261800 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr11:120257800-120262200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr11:120257800-120262200 Weak transcription NHDF-Ad bronchial
19 chr11:120257800-120263200 Weak transcription NHLF lung
20 chr11:120258000-120262200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr11:120258000-120263000 Weak transcription Osteobl bone
22 chr11:120258000-120263400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr11:120258200-120262000 Weak transcription Brain Germinal Matrix brain
24 chr11:120258200-120262800 Weak transcription Muscle Satellite Cultured Cells --
25 chr11:120258200-120262800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:120258400-120262000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr11:120260600-120262800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr11:120260600-120262800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr11:120260600-120262800 Enhancers HUVEC blood vessel
30 chr11:120260600-120263200 Enhancers Liver Liver
31 chr11:120260800-120261800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr11:120260800-120262000 Flanking Active TSS HepG2 liver
33 chr11:120260800-120262200 Enhancers Rectal Mucosa Donor 31 rectum
34 chr11:120260800-120262600 Enhancers A549 lung
35 chr11:120260800-120263000 Enhancers Stomach Mucosa stomach
36 chr11:120260800-120263600 Enhancers Fetal Intestine Large intestine
37 chr11:120260800-120263600 Enhancers HMEC breast
38 chr11:120260800-120263800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr11:120260800-120263800 Enhancers Fetal Intestine Small intestine
40 chr11:120261000-120262400 Enhancers Fetal Brain Female brain
41 chr11:120261000-120263200 Enhancers Pancreatic Islets Pancreatic Islet
42 chr11:120261000-120263600 Enhancers Adipose Nuclei Adipose
43 chr11:120261000-120263600 Enhancers Brain Hippocampus Middle brain
44 chr11:120261000-120263600 Enhancers Brain Inferior Temporal Lobe brain
45 chr11:120261000-120263800 Enhancers Cortex derived primary cultured neurospheres brain
46 chr11:120261000-120263800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr11:120261000-120263800 Enhancers Brain Cingulate Gyrus brain
48 chr11:120261000-120264000 Enhancers Brain Anterior Caudate brain
49 chr11:120261200-120262000 Enhancers Rectal Smooth Muscle rectum
50 chr11:120261200-120262200 Weak transcription Fetal Lung lung

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