Variant report

Variant	rs7482931
Chromosome Location	chr11:45284050-45284051
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1000664	0.99[ASN][1000 genomes]
rs10742747	0.98[ASN][1000 genomes]
rs10769132	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2863172	0.87[ASN][1000 genomes]
rs2863173	0.87[ASN][1000 genomes]
rs2863174	0.86[ASN][1000 genomes]
rs2863175	0.87[ASN][1000 genomes]
rs2902427	0.87[ASN][1000 genomes]
rs2902428	0.87[ASN][1000 genomes]
rs3793	0.86[ASN][1000 genomes]
rs3816205	0.92[ASN][1000 genomes]
rs4237652	0.93[ASN][1000 genomes]
rs4237653	0.87[ASN][1000 genomes]
rs4755307	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs4755938	0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4755941	0.87[ASN][1000 genomes]
rs6416129	0.87[ASN][1000 genomes]
rs6416130	0.92[ASN][1000 genomes]
rs6416131	0.92[ASN][1000 genomes]
rs6416132	0.99[ASN][1000 genomes]
rs6485604	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6485606	0.93[ASN][1000 genomes]
rs7101799	0.85[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7103871	0.92[ASN][1000 genomes]
rs7108623	0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7110272	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7114149	0.90[ASN][1000 genomes]
rs7114849	0.86[ASN][1000 genomes]
rs714720	0.87[ASN][1000 genomes]
rs7478781	0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7481764	0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7940907	0.99[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45281400-45286000	Weak transcription	Colonic Mucosa	Colon
2	chr11:45281600-45284400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr11:45281600-45284400	Weak transcription	HSMMtube	muscle
4	chr11:45281600-45284400	Weak transcription	Osteobl	bone
5	chr11:45281600-45285600	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr11:45281600-45286200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr11:45281800-45284800	Enhancers	Hela-S3	cervix
8	chr11:45281800-45285600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr11:45281800-45285800	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr11:45281800-45285800	Weak transcription	HSMM	muscle
11	chr11:45281800-45286000	Weak transcription	NHDF-Ad	bronchial
12	chr11:45282000-45284400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr11:45282000-45285400	Weak transcription	Stomach Mucosa	stomach
14	chr11:45282200-45286000	Weak transcription	NH-A	brain
15	chr11:45282200-45286800	Weak transcription	Pancreas	Pancrea
16	chr11:45282400-45284200	Weak transcription	A549	lung
17	chr11:45282600-45284200	Weak transcription	Duodenum Mucosa	Duodenum
18	chr11:45282600-45284400	Weak transcription	Fetal Intestine Large	intestine
19	chr11:45282600-45286000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr11:45282600-45286800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr11:45282600-45286800	Weak transcription	Fetal Brain Female	brain
22	chr11:45282600-45288800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr11:45282800-45284600	Weak transcription	Rectal Mucosa Donor 31	rectum
24	chr11:45282800-45284800	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr11:45283400-45288800	Enhancers	Fetal Intestine Small	intestine
26	chr11:45283600-45286000	Enhancers	Muscle Satellite Cultured Cells	--
27	chr11:45284000-45285400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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