Variant report

Variant	rs7492831
Chromosome Location	chr14:32831095-32831096
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10131297	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10135655	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs10137472	0.82[JPT][hapmap]
rs10151990	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10483399	0.82[JPT][hapmap]
rs17098767	0.82[JPT][hapmap]
rs17098781	0.82[JPT][hapmap];0.89[EUR][1000 genomes]
rs17098833	0.82[JPT][hapmap];0.89[EUR][1000 genomes]
rs17098838	0.82[JPT][hapmap]
rs17098884	1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3784172	0.82[JPT][hapmap]
rs3825744	1.00[CEU][hapmap];0.82[JPT][hapmap]
rs61981849	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61981850	0.88[EUR][1000 genomes]
rs7151141	0.82[JPT][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9322897	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3386382	chr14:32830429-32831802	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32797200-32831600	Weak transcription	Right Atrium	heart
2	chr14:32819200-32834200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:32822400-32834400	Weak transcription	Fetal Brain Female	brain
4	chr14:32828000-32835200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr14:32828200-32831800	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr14:32828200-32833400	Weak transcription	Brain Germinal Matrix	brain
7	chr14:32829000-32831400	Weak transcription	Brain Hippocampus Middle	brain
8	chr14:32830400-32831400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr14:32830400-32831600	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr14:32830400-32835000	Enhancers	Brain Anterior Caudate	brain
11	chr14:32830600-32831600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr14:32830600-32833400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
13	chr14:32830600-32840400	Enhancers	Brain Cingulate Gyrus	brain
14	chr14:32830600-32843800	Enhancers	Cortex derived primary cultured neurospheres	brain
15	chr14:32830800-32831600	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr14:32830800-32835600	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr14:32831000-32831400	Weak transcription	Brain Substantia Nigra	brain
18	chr14:32831000-32831600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr14:32831000-32835400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr14:32831000-32838000	Enhancers	Brain Angular Gyrus	brain

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