Variant report

Variant	rs752376
Chromosome Location	chr1:150941381-150941382
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:26)
CpG islands
(count:0)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:26 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:150941211-150941647	ECC-1	luminal epithelium:	n/a	n/a
2	POLR2A	chr1:150941379-150941618	HCT-116	colon:	n/a	n/a
3	POLR2A	chr1:150937947-150941540	K562	blood:	n/a	n/a
4	POLR2A	chr1:150939898-150941623	GM12878	blood:	n/a	n/a
5	POLR2A	chr1:150937880-150941711	K562	blood:	n/a	n/a
6	POLR2A	chr1:150937808-150941768	H1-hESC	embryonic stem cell:	n/a	n/a
7	POLR2A	chr1:150941184-150941424	Hela-S3	cervix:	n/a	n/a
8	POLR2A	chr1:150941369-150941757	HepG2	liver:	n/a	n/a
9	POLR2A	chr1:150940592-150941821	Hela-S3	cervix:	n/a	n/a
10	POLR2A	chr1:150941297-150941482	A549	lung:	n/a	n/a
11	POLR2A	chr1:150940584-150941695	K562	blood:	n/a	n/a
12	POLR2A	chr1:150940294-150941617	K562	blood:	n/a	n/a
13	USF2	chr1:150941319-150941398	Hela-S3	cervix:	n/a	n/a
14	POLR2A	chr1:150941227-150941586	H1-hESC	embryonic stem cell:	n/a	n/a
15	POLR2A	chr1:150939652-150941432	U87	brain:	n/a	n/a
16	POLR2A	chr1:150937934-150941687	Hela-S3	cervix:	n/a	n/a
17	POLR2A	chr1:150937798-150941740	SK-N-MC	brain:	n/a	n/a
18	POLR2A	chr1:150939257-150941601	HepG2	liver:	n/a	n/a
19	POLR2A	chr1:150940186-150941660	HL-60	blood:	n/a	n/a
20	POLR2A	chr1:150941307-150941560	H1-hESC	embryonic stem cell:	n/a	n/a
21	POLR2A	chr1:150937726-150941789	PFSK-1	brain:	n/a	n/a
22	POLR2A	chr1:150941064-150941477	SK-N-SH	brain:	n/a	n/a
23	POLR2A	chr1:150937918-150941619	MCF-7	breast:	n/a	n/a
24	POLR2A	chr1:150939601-150941409	PANC-1	pancreas:	n/a	n/a
25	POLR2A	chr1:150939680-150941775	GM12878	blood:	n/a	n/a
26	POLR2A	chr1:150941306-150941527	H1-hESC	embryonic stem cell:	n/a	n/a

No data

Variant related genes	Relation type
ENSG00000231073	TF binding region
CERS2	TF binding region

Extended variants
information (count: 101 )
Associated
traits (count: 40 )

rSNPs within LD-proxies of this variant (count:96)

rs_ID	r²[population]
rs10305704	0.88[CEU][hapmap];0.83[TSI][hapmap]
rs10305711	0.84[CEU][hapmap];0.82[TSI][hapmap]
rs10305714	0.87[CEU][hapmap];0.83[TSI][hapmap]
rs10399947	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10888394	1.00[CEU][hapmap];0.80[GIH][hapmap];0.95[TSI][hapmap]
rs10888395	0.81[EUR][1000 genomes]
rs10888397	0.88[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10888398	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11204726	1.00[CEU][hapmap];0.80[GIH][hapmap];0.95[TSI][hapmap]
rs11204739	0.91[ASN][1000 genomes]
rs11204742	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11204743	0.95[ASN][1000 genomes]
rs11204747	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11204748	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11204749	0.87[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11204750	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11552229	0.88[CEU][hapmap];0.83[TSI][hapmap]
rs11579736	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11581757	0.88[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11583707	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11589886	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11800855	0.82[EUR][1000 genomes]
rs12059949	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12067685	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12075597	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12085336	1.00[CEU][hapmap];0.80[GIH][hapmap];0.81[EUR][1000 genomes]
rs12090215	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12096831	0.82[CHB][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs12097963	0.91[ASN][1000 genomes]
rs12119409	0.90[CHB][hapmap]
rs12141871	0.90[CHB][hapmap]
rs12145224	0.91[CHB][hapmap]
rs12405726	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12409208	0.88[CEU][hapmap];0.82[CHB][hapmap];0.83[CHD][hapmap];0.82[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.82[ASN][1000 genomes]
rs12410394	0.82[ASN][1000 genomes]
rs12410869	1.00[ASW][hapmap];1.00[CEU][hapmap];0.87[CHB][hapmap];0.83[CHD][hapmap];0.84[GIH][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12562939	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1546376	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1889740	1.00[CEU][hapmap];0.80[GIH][hapmap];0.95[TSI][hapmap];0.82[EUR][1000 genomes]
rs1889741	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1972060	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2004903	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2124952	0.88[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2228099	1.00[CEU][hapmap];0.95[TSI][hapmap];0.82[EUR][1000 genomes]
rs2256355	1.00[CEU][hapmap];0.80[GIH][hapmap];0.95[TSI][hapmap];0.82[EUR][1000 genomes]
rs2271076	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2272214	0.88[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2280627	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2864873	1.00[CEU][hapmap];0.80[GIH][hapmap];0.95[TSI][hapmap];0.82[EUR][1000 genomes]
rs2864882	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2867296	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2867297	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34985895	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs36008098	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3738478	0.81[CHB][hapmap]
rs3754211	0.83[MEX][hapmap]
rs3768013	1.00[CEU][hapmap];0.80[GIH][hapmap];0.91[TSI][hapmap];0.81[EUR][1000 genomes]
rs3768015	0.88[CEU][hapmap];0.83[TSI][hapmap]
rs3768016	0.88[CEU][hapmap];0.83[TSI][hapmap]
rs3843843	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3849279	1.00[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];0.92[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4451553	0.84[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.81[TSI][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4509581	0.95[CEU][hapmap]
rs4970928	0.92[ASN][1000 genomes]
rs4970929	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4970930	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4970931	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4970980	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4970982	0.91[ASN][1000 genomes]
rs4970984	0.97[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4970985	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4970986	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4970987	0.87[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4970988	0.88[CEU][hapmap];0.95[CHB][hapmap];0.86[CHD][hapmap];0.88[GIH][hapmap];0.86[JPT][hapmap];0.91[MEX][hapmap];0.81[TSI][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs59024312	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6587542	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6658066	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6664622	0.90[CHB][hapmap]
rs6669855	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6677420	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66847267	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6686064	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72704656	0.82[EUR][1000 genomes]
rs72704679	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72704682	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72704685	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7514004	0.82[EUR][1000 genomes]
rs7518156	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7528773	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7532045	1.00[CEU][hapmap];0.80[GIH][hapmap];0.95[TSI][hapmap];0.81[EUR][1000 genomes]
rs7548516	0.86[CHB][hapmap];0.82[CHD][hapmap]
rs7556451	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7556661	0.88[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8444	0.88[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs897815	0.88[CEU][hapmap];0.91[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.80[AMR][1000 genomes];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9661876	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001897	chr1:150743271-151241600	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
2	nsv535158	chr1:150743271-151241600	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
3	nsv1008496	chr1:150845827-150970656	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
4	nsv522317	chr1:150933723-150974162	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
5	nsv522840	chr1:150933723-151347746	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	169 gene(s)	inside rSNPs	diseases

mRNA abundance (count:40)

SNP	Gene	Cis/trans	Tissue	Source
rs752376	CTSS	Cis_1M	lymphoblastoid	RTeQTL
rs752376	GOLPH3L	cis	Nerve Tibial	GTEx
rs752376	CD160	cis	parietal	SCAN
rs752376	CTSS	cis	cerebellum	SCAN
rs752376	RP11-316M1.12	cis	Whole Blood	GTEx
rs752376	CTSK	cis	parietal	SCAN
rs752376	RP11-316M1.12	cis	Heart Left Ventricle	GTEx
rs752376	RP11-316M1.12	cis	Skin Sun Exposed Lower leg	GTEx
rs752376	RP11-316M1.12	cis	Thyroid	GTEx
rs752376	RP11-316M1.12	cis	Artery Tibial	GTEx
rs752376	RP11-316M1.12	cis	lung	GTEx
rs752376	CTSS	cis	lymphoblastoid	seeQTL
rs752376	CTSS	cis	Thyroid	GTEx
rs752376	CA14	cis	cerebellum	SCAN
rs752376	RP11-316M1.12	cis	Esophagus Mucosa	GTEx
rs752376	ARNT	cis	cerebellum	SCAN
rs752376	RNU6-1042P	cis	Esophagus Mucosa	GTEx
rs752376	RORC	cis	parietal	SCAN
rs752376	HORMAD1	cis	Esophagus Mucosa	GTEx
rs752376	HORMAD1	cis	Nerve Tibial	GTEx
rs752376	PSMD4	cis	parietal	SCAN
rs752376	HORMAD1	cis	cerebellum	SCAN
rs752376	RP11-98D18.3	cis	Esophagus Mucosa	GTEx
rs752376	CTSS	cis	multi-tissue	Pritchard
rs752376	CTSS	cis	parietal	SCAN
rs752376	CTSK	Cis_1M	lymphoblastoid	RTeQTL
rs752376	GOLPH3L	cis	Skin Sun Exposed Lower leg	GTEx
rs752376	CTSK	cis	cerebellum	SCAN
rs752376	ARNT	cis	parietal	SCAN
rs752376	HORMAD1	cis	Adipose Subcutaneous	GTEx
rs752376	ARNT	Cis_1M	lymphoblastoid	RTeQTL
rs752376	HORMAD1	cis	Skin Sun Exposed Lower leg	GTEx
rs752376	RP11-316M1.12	cis	Esophagus Muscularis	GTEx
rs752376	RP11-316M1.12	cis	Artery Aorta	GTEx
rs752376	RP11-316M1.12	cis	Nerve Tibial	GTEx
rs752376	RP11-316M1.12	cis	Adipose Subcutaneous	GTEx
rs752376	HFE2	cis	parietal	SCAN
rs752376	GNRHR2	cis	cerebellum	SCAN
rs752376	RP11-316M1.12	cis	Muscle Skeletal	GTEx
rs752376	HORMAD1	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:150899600-150943400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:150900200-150941800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
3	chr1:150900400-150942600	Weak transcription	Stomach Mucosa	stomach
4	chr1:150900400-150944200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr1:150901000-150941600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr1:150901600-150941600	Strong transcription	Rectal Mucosa Donor 29	rectum
7	chr1:150903600-150941600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr1:150903600-150942200	Strong transcription	Dnd41	blood
9	chr1:150903600-150942800	Strong transcription	Fetal Stomach	stomach
10	chr1:150903600-150943000	Strong transcription	Primary T helper cells fromperipheralblood	blood
11	chr1:150903600-150943200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
12	chr1:150903800-150942600	Strong transcription	Fetal Thymus	thymus
13	chr1:150904600-150942200	Strong transcription	Duodenum Mucosa	Duodenum
14	chr1:150904600-150942400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr1:150904600-150942400	Strong transcription	Monocytes-CD14+_RO01746	blood
16	chr1:150904600-150943400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr1:150904800-150941800	Strong transcription	Primary monocytes fromperipheralblood	blood
18	chr1:150904800-150941800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr1:150905000-150941800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr1:150905000-150942000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
21	chr1:150905000-150942400	Strong transcription	Primary neutrophils fromperipheralblood	blood
22	chr1:150905000-150943000	Strong transcription	HUES64 Cell Line	embryonic stem cell
23	chr1:150905400-150942800	Strong transcription	Fetal Muscle Leg	muscle
24	chr1:150905600-150942000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr1:150906200-150942400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr1:150906400-150941600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr1:150907000-150941600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
28	chr1:150907000-150941800	Strong transcription	Fetal Brain Female	brain
29	chr1:150907000-150942200	Strong transcription	HUES48 Cell Line	embryonic stem cell
30	chr1:150907000-150942400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
31	chr1:150907200-150941600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
32	chr1:150908400-150941800	Strong transcription	Fetal Muscle Trunk	muscle
33	chr1:150908600-150941600	Strong transcription	Sigmoid Colon	Sigmoid Colon
34	chr1:150908600-150941800	Strong transcription	Primary B cells from peripheral blood	blood
35	chr1:150909400-150941800	Strong transcription	Primary T cells fromperipheralblood	blood
36	chr1:150909600-150941800	Strong transcription	Stomach Smooth Muscle	stomach
37	chr1:150911400-150941600	Strong transcription	Cortex derived primary cultured neurospheres	brain
38	chr1:150912000-150941600	Strong transcription	Ovary	ovary
39	chr1:150912200-150941600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr1:150925000-150941600	Strong transcription	Lung	lung
41	chr1:150926600-150941600	Strong transcription	Primary T cells from cord blood	blood
42	chr1:150926600-150941600	Strong transcription	Primary T helper cells PMA-I stimulated	--
43	chr1:150926600-150941600	Strong transcription	Skeletal Muscle Male	skeletal muscle
44	chr1:150926800-150941600	Strong transcription	HSMMtube	muscle
45	chr1:150927000-150942400	Strong transcription	Primary B cells from cord blood	blood
46	chr1:150927200-150941600	Strong transcription	Hela-S3	cervix
47	chr1:150927400-150941800	Strong transcription	Thymus	Thymus
48	chr1:150929400-150941400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr1:150929400-150941600	Strong transcription	H9 Cell Line	embryonic stem cell
50	chr1:150929400-150941800	Strong transcription	Skeletal Muscle Female	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links