Variant report

Variant rs7523790
Chromosome Location chr1:227060490-227060491
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227057800-227060600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr1:227059000-227061800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:227059000-227066800 Weak transcription Aorta Aorta
4 chr1:227059200-227060600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:227059200-227060600 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr1:227059200-227060600 Enhancers Placenta Placenta
7 chr1:227059200-227060600 Enhancers Left Ventricle heart
8 chr1:227059200-227060600 Enhancers Lung lung
9 chr1:227059200-227060600 Enhancers HUVEC blood vessel
10 chr1:227059200-227061000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:227059200-227063600 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:227059200-227069000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:227059400-227060600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:227059400-227060600 Enhancers Primary hematopoietic stem cells blood
15 chr1:227059400-227060600 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr1:227059400-227060600 Enhancers Fetal Intestine Large intestine
17 chr1:227059400-227063400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:227059400-227063400 Weak transcription NH-A brain
19 chr1:227059400-227069600 Weak transcription Primary B cells from cord blood blood
20 chr1:227059600-227060600 Enhancers Adipose Nuclei Adipose
21 chr1:227059600-227060600 Enhancers Liver Liver
22 chr1:227059600-227060600 Enhancers Gastric stomach
23 chr1:227059600-227060600 Enhancers Stomach Mucosa stomach
24 chr1:227059600-227063200 Weak transcription NHEK skin
25 chr1:227059600-227066000 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:227059600-227068400 Weak transcription Brain Hippocampus Middle brain
27 chr1:227059600-227069200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:227059600-227070200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:227059800-227060600 Enhancers Skeletal Muscle Male skeletal muscle
30 chr1:227059800-227060600 Enhancers NHLF lung
31 chr1:227059800-227061400 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:227059800-227061600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:227059800-227061600 Weak transcription H9 Cell Line embryonic stem cell
34 chr1:227059800-227062200 Weak transcription A549 lung
35 chr1:227059800-227062600 Weak transcription Fetal Intestine Small intestine
36 chr1:227059800-227062600 Weak transcription Right Ventricle heart
37 chr1:227059800-227063400 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr1:227059800-227063400 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr1:227059800-227063400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:227059800-227063600 Weak transcription Colonic Mucosa Colon
41 chr1:227059800-227064400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:227059800-227064400 Weak transcription Primary B cells from peripheral blood blood
43 chr1:227059800-227064600 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr1:227059800-227064600 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:227059800-227064600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:227059800-227065000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:227059800-227067400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr1:227059800-227070200 Weak transcription Osteobl bone
49 chr1:227059800-227075600 Weak transcription Brain Substantia Nigra brain
50 chr1:227059800-227095000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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