Variant report

Variant	rs7536632
Chromosome Location	chr1:102358232-102358233
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1415099	1.00[ASN][1000 genomes]
rs1539091	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap]
rs1577717	1.00[ASN][1000 genomes]
rs17125616	1.00[ASN][1000 genomes]
rs17430580	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs17431961	0.90[CEU][hapmap];0.96[GIH][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17432141	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17470860	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1856037	1.00[CHB][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1981158	1.00[ASN][1000 genomes]
rs4907956	1.00[CHB][hapmap]
rs58587209	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6682150	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs6694948	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs6695052	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs72729689	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9943151	1.00[ASN][1000 genomes]
rs9943277	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522921	chr1:102170295-102876392	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv522156	chr1:102309649-102421714	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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