The 2.0 version of rSNPBase

Variant report

Variant rs7543619
Chromosome Location chr1:172948189-172948190
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:13 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172944800-172950200 Enhancers HUVEC blood vessel
2 chr1:172945800-172949600 Weak transcription NHLF lung
3 chr1:172947000-172949600 Weak transcription NH-A brain
4 chr1:172947200-172949600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:172947200-172949600 Weak transcription Osteobl bone
6 chr1:172947200-172949800 Weak transcription HepG2 liver
7 chr1:172947200-172959000 Weak transcription HSMM muscle
8 chr1:172947400-172949600 Weak transcription Muscle Satellite Cultured Cells --
9 chr1:172947600-172948200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:172947800-172948200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
11 chr1:172947800-172949800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:172948000-172948200 Enhancers A549 lung
13 chr1:172948000-172949600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015