Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:217301751..217304331-chr1:217305363..217307786,2	MCF-7	breast:
2	chr1:217306018..217307613-chr1:217317888..217320391,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10158793	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11117771	1.00[CEU][hapmap]
rs11117773	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12119709	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12121561	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12121769	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12122960	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12125004	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12125898	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12126433	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12131437	1.00[CEU][hapmap]
rs12133995	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12135903	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12141781	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17696143	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs41283142	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6674783	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7518540	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7533486	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7550505	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs830304	1.00[CEU][hapmap];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428610	chr1:217143317-217307243	Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217298200-217307000	Weak transcription	Fetal Heart	heart
2	chr1:217306400-217307400	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:217306600-217307400	Weak transcription	Pancreas	Pancrea
4	chr1:217306600-217307800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell

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