The 2.0 version of rSNPBase

Variant report

Variant rs7547071
Chromosome Location chr1:227014390-227014391
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227003400-227015000 Weak transcription Thymus Thymus
2 chr1:227009400-227015200 Weak transcription NHEK skin
3 chr1:227009600-227014800 Weak transcription Fetal Kidney kidney
4 chr1:227009800-227014600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:227009800-227015200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr1:227009800-227015200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:227009800-227015200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:227009800-227015600 Weak transcription Osteobl bone
9 chr1:227010000-227014600 Weak transcription Adipose Nuclei Adipose
10 chr1:227010000-227014600 Weak transcription Colonic Mucosa Colon
11 chr1:227010000-227014800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:227010000-227015000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:227010000-227015200 Weak transcription Duodenum Mucosa Duodenum
14 chr1:227010000-227015200 Weak transcription Esophagus oesophagus
15 chr1:227010000-227015200 Weak transcription Right Ventricle heart
16 chr1:227010000-227015200 Weak transcription HSMM muscle
17 chr1:227010000-227015200 Weak transcription HUVEC blood vessel
18 chr1:227010000-227015600 Weak transcription Left Ventricle heart
19 chr1:227010200-227014800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:227010200-227014800 Weak transcription NHDF-Ad bronchial
21 chr1:227010200-227015200 Weak transcription Fetal Lung lung
22 chr1:227010200-227015200 Weak transcription Placenta Amnion Placenta Amnion
23 chr1:227010200-227015200 Weak transcription Right Atrium heart
24 chr1:227010600-227014800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:227011000-227014600 Weak transcription Rectal Smooth Muscle rectum
26 chr1:227011200-227015200 Enhancers Brain Substantia Nigra brain
27 chr1:227011400-227015200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr1:227011400-227015400 Enhancers Brain Cingulate Gyrus brain
29 chr1:227011400-227016000 Enhancers Brain Hippocampus Middle brain
30 chr1:227011600-227014600 Weak transcription Colon Smooth Muscle Colon
31 chr1:227011600-227015400 Enhancers Brain Inferior Temporal Lobe brain
32 chr1:227011600-227015600 Enhancers Brain Anterior Caudate brain
33 chr1:227011800-227015000 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr1:227011800-227015200 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr1:227012000-227014600 Weak transcription Spleen Spleen
36 chr1:227012600-227015200 Weak transcription Primary B cells from cord blood blood
37 chr1:227013000-227015200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:227013000-227015400 Weak transcription Primary hematopoietic stem cells blood
39 chr1:227013200-227015000 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr1:227013200-227016400 Enhancers Fetal Muscle Trunk muscle
41 chr1:227013400-227016200 Enhancers GM12878-XiMat blood
42 chr1:227013600-227014600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr1:227013600-227014800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:227013600-227015600 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:227013600-227016200 Enhancers Placenta Placenta
46 chr1:227013800-227014600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:227013800-227014600 Weak transcription Brain Angular Gyrus brain
48 chr1:227013800-227014600 Weak transcription Stomach Smooth Muscle stomach
49 chr1:227013800-227014800 Weak transcription Primary T cells from cord blood blood
50 chr1:227013800-227014800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015