Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10165154	0.81[JPT][hapmap]
rs10182288	0.87[CHB][hapmap]
rs11693445	0.88[CHB][hapmap]
rs13012265	0.81[JPT][hapmap]
rs13031056	0.80[JPT][hapmap]
rs13408365	0.81[JPT][hapmap]
rs13418027	0.81[JPT][hapmap]
rs13429414	0.81[JPT][hapmap]
rs1369528	0.81[JPT][hapmap]
rs1369530	0.88[CHB][hapmap]
rs1435598	0.83[JPT][hapmap]
rs1561019	0.81[JPT][hapmap]
rs16847640	0.85[JPT][hapmap]
rs1898018	0.81[JPT][hapmap]
rs1991997	0.81[JPT][hapmap]
rs1991998	0.81[JPT][hapmap]
rs4662555	0.81[JPT][hapmap]
rs4662557	0.81[JPT][hapmap]
rs6429927	0.81[JPT][hapmap]
rs7579772	0.88[CHB][hapmap]
rs7593594	0.81[JPT][hapmap]
rs7602677	0.87[CHB][hapmap];0.90[JPT][hapmap];0.80[ASN][1000 genomes]
rs9287326	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530398	chr2:142474842-142843839	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1009893	chr2:142585905-142662116	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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