Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10165137	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs10168923	1.00[GIH][hapmap];1.00[TSI][hapmap]
rs10172428	1.00[CEU][hapmap]
rs10182183	1.00[CEU][hapmap]
rs10187198	1.00[EUR][1000 genomes]
rs10202474	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10204235	1.00[CEU][hapmap]
rs10210543	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs11886397	1.00[CEU][hapmap];0.83[YRI][hapmap];1.00[EUR][1000 genomes]
rs11904176	1.00[CEU][hapmap]
rs13403519	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs13414179	1.00[CEU][hapmap]
rs17012102	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17012116	0.85[GIH][hapmap];1.00[TSI][hapmap]
rs17012123	1.00[GIH][hapmap];1.00[TSI][hapmap]
rs1840209	0.85[GIH][hapmap];1.00[TSI][hapmap]
rs1840210	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs62171358	1.00[EUR][1000 genomes]
rs62173261	1.00[EUR][1000 genomes]
rs73955848	1.00[EUR][1000 genomes]
rs73955852	1.00[EUR][1000 genomes]
rs7559266	1.00[CEU][hapmap]
rs7567297	1.00[EUR][1000 genomes]
rs7604892	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7605407	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7606120	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv834361	chr2:125601081-125810992	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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